Query= MSMg01no379_d12.b1 MSMg01no379_d12.b1 CHROMAT_FILE:
MSMg01no379_d12.b1 PHD_FILE: MSMg01no379_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:55 2005
(474 letters)
>mm_chr9_60830782_60831655
Length = 874
Score = 824 bits (426), Expect = 0.0
Identities = 462/474 (97%)
Strand = Plus / Minus
Query: 1 tggaaactgagtgtgccgtgggagcacagttggtcacaagtaaatcagagacatagcttt 60
|||||||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||
Sbjct: 674 tggaaactgagtgtgccgtgggagcacagtcggtcacaagtaaaacagagacgtaccttt 615
Query: 61 accttaccctagagacatggcatccaggccctgcagggtccatgtgttgaccacactggg 120
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 614 accttaccctagagacatggcattcaggccctgcaggctccatgtgttgaccacactggg 555
Query: 121 ccttgcagcagctggtccttactcccttgaccttgaatgacccagactaaatgtgacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 554 ccttgcagcagctggtccttactcccttgaccttgaatgacccagactaaacgtgacaaa 495
Query: 181 tgagcaaacttattgggtttgaatgctgataccaccacaatggttgacatctggactcac 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgagcaaacttactgggtttgaatgctgataccaccacaatggttgacatctggactcac 435
Query: 241 attagctttttcctgcttcacacagggcactctgattttaattatgggtgttttaggagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attagctttttcctgcttcacacagggcactctgattttaattatgggtgttttaggagc 375
Query: 301 tgaggggtagggtagaaacaggagtcaagtgtgagaattcaagcgcagatgcccagaacc 360
|||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 374 tgaggggtagggtagaaacaggagtcaagtgtgagaatacaagcacagatacccagaacc 315
Query: 361 cgtctaaagctggaccaacagggcatgtctgtaatcccagatggagatgagactccccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cgtctaaagctggaccaacagggcatgtctgtaatcccagatggagatgagactccccaa 255
Query: 421 aagctctcaggctggccaacatatatatgtggagggaggaagagggagggagaa 474
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 254 aagctctcaggctggccaacatatatatgtggagggaggaagagggagagagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_d12.g1 MSMg01no379_d12.g1 CHROMAT_FILE:
MSMg01no379_d12.g1 PHD_FILE: MSMg01no379_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:55 2005
(397 letters)
>mm_chr9_60658157_60658953
Length = 797
Score = 741 bits (383), Expect = 0.0
Identities = 395/401 (98%), Gaps = 4/401 (0%)
Strand = Plus / Plus
Query: 1 ctgcagccgaatgacaggaaacttcagatggactccctaggaaactgctgcccgacagcc 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctgcagccgaatgacatgaaacttcagatggactccctaggaaactgctgcctgacagcc 260
Query: 61 atagcaacgccgtactccgtggctctgactctttgcgctgtgataagtaaatgctttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagcaacgccgtactccgtggctctgactctttgcgctgtgataagtaaatgctttcct 320
Query: 121 gtgtgtgggctgacttgtatgtgtgcgtttgtgtggtgcgataatatattttcatgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtgtgggctgacttgtatgtgtgcgtttgtgtggtgcgataatatattttcatgtatg 380
Query: 181 tgcgcctgtgggggccagagatctatgttgggtgtctgtctccctgtgtgattacccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcgcctgtgggggccagagatctatgttgggtgtctgtctccctgtgtgattacccact 440
Query: 241 tgtattttggttcagggtccctcagtgaacttagaactcaaagattcaactggactgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtattttggttcagggtccctcagtgaacttagaactcaaagattcaactggactgggc 500
Query: 301 cagcaaactgcctgccctcctccagcactggggctagacatgtgcatagcactacttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagcaaactgcctgccctcctccagcactggggctagacatgtgcatagcactacttagc 560
Query: 361 tttcgtgtgtgcatgcat----gcatgcgtgcgtgcatgag 397
|||||||||||||||||| |||||||||||||||||||
Sbjct: 561 tttcgtgtgtgcatgcattcatgcatgcgtgcgtgcatgag 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
