Query= MSMg01no382_d19.b1 MSMg01no382_d19.b1 CHROMAT_FILE:
MSMg01no382_d19.b1 PHD_FILE: MSMg01no382_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:55 2005
(587 letters)
>mm_chr9_56190327_56191313
Length = 987
Score = 1098 bits (568), Expect = 0.0
Identities = 583/588 (99%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 gattgatccatatgataggacgatactgatattacatcacatcaccataaaagcttaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattgatccatatgataggacgatactgatattacatcacatcaccataaaagcttaggt 260
Query: 61 ttctcatttttccaataaagatactctctccaataccaataccacagccaaagtcaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcatttttccaataaagatactctctccaataccaataccacagccaaagtcaacac 320
Query: 121 attaacctaccctgtaactgatagacctactcaagtttcactagtgtcttctgtgacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaacctaccctgtaactgatagacctactcaagtttcactagtgtcttctgtgacaaa 380
Query: 181 aggatctggtcagtcattataggctgcaattatctgtaacgtttatatagtctccttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggatctggtcagtcattataggctgcaattatctgtaacgtttatatagtctccttata 440
Query: 241 cctagaatagttctttaaattattctggattttcacaatattttaagttggaaaactata 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagaatagttcttaaaattattctggattttcacaatattttaagttggaaaactata 500
Query: 301 ggctaagtaaccttaattggaactctctaacctttcttcaaaattacattttggcaatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggctaagtaaccttaattggaactctctaacctttcttcaaaattacattttggcaatgc 560
Query: 361 atttttggggagaagtatcagagaaatgaaactatattcctacactgcatcccttcaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttttggggagaagtatcagagaaatgaaactatattcctacactgcatcccttcaagt 620
Query: 421 tatacacacatcattttgc-cctgactaaggaagtatctttcaggttccctctttgacaa 479
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 tatacacacatcattttgctcctgactgaggaagtatctttcaggttccctctttgacaa 680
Query: 480 attcttctttcctttgtaattgatattttgtgaggagaaaacatgactatgcaaggccac 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 attcttctttcctttgtaattgatactttgtgaggagaaaacatgactatgcaaggccac 740
Query: 540 caaactttttaccaattaattttaggatctggtattttatatataaac 587
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 caaactttttaccaattaattttaggatctgttattttatatataaac 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_d19.g1 MSMg01no382_d19.g1 CHROMAT_FILE:
MSMg01no382_d19.g1 PHD_FILE: MSMg01no382_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:56 2005
(527 letters)
>mm_chr9_56334750_56335676
Length = 927
Score = 1004 bits (519), Expect = 0.0
Identities = 525/527 (99%)
Strand = Plus / Minus
Query: 1 ttcggtaaatatagggatatcaaaaacagagcgttcctttacctctgtttctttctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttcggtaaatatagggatatcaaaaacagagcgttcctttacctctgtttctttctatga 668
Query: 61 atcaagaacaagagttaatttttagaagataaattaaatactactgcccaagacacagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atcaagaacaagagttaatttttagaagataaattaaatactactgcccaagacacagga 608
Query: 121 tcatgtcttccttagagagatagctggtgagcaggaatcagaccaggagagcctgggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tcatgtcttccttagagagatagctggtgagcaggaatcagaccaggagagcctgggagg 548
Query: 181 ggaatgtattcaccgcattagaatggaacgtcacagagctgaaacggttagtattagatc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 547 ggaatgtattcaccgcattagaatggaacgtcacagagctgaagcggttagtattagatc 488
Query: 241 tcttaggtgaatggctgctgggtagtgaaggactacaaacccacatgcatttcactagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcttaggtgaatggctgctgggtagtgaaggactacaaacccacatgcatttcactagtg 428
Query: 301 aagacaacagaagccttttcttagccctgagctttgaatagtcaacagtggagagttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagacaacagaagccttttcttagccctgagctttgaatagtcaacagtggagagttgtg 368
Query: 361 catatggctgggttaggaattaaaaaaggggtatttccagttgttcctactggcttccca 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 367 catatggctgggttaggaatttaaaaaggggtatttccagttgttcctactggcttccca 308
Query: 421 tttaagccctatctgagataagagtatgcaatctagatttgctgagtggagaataagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tttaagccctatctgagataagagtatgcaatctagatttgctgagtggagaataagaat 248
Query: 481 tctaagcggatctgccagtgagcaatcataatggcattccgctgata 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tctaagcggatctgccagtgagcaatcataatggcattccgctgata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
