Query= MSMg01no383_a10.b1 MSMg01no383_a10.b1 CHROMAT_FILE:
MSMg01no383_a10.b1 PHD_FILE: MSMg01no383_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:57 2005
(525 letters)
>mm_chr9_34637122_34638045
Length = 924
Score = 984 bits (509), Expect = 0.0
Identities = 518/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaaataccctacaaattaatatgtaagtgcatttaaatatagtgggaatctgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaataccctacaaattaatatgtaagtgcatttaaatatagtgggaatctgg 264
Query: 65 ctacaggagctaggttcttgatgaacaacagggaaatggagctagctgcaagggtcagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacaggagctaggttcttgatgaacaacagggaaatggagctagctgcaagggtcagat 324
Query: 125 agcatcatgcagacatgtaagatgtccccacccccaccccccaaaaaggcaagaggccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcatcatgcagacatgtaagatgtccccacccccaccccccaaaaaggcaagaggccca 384
Query: 185 tgctgaatgtagcttgcaaatgtcttaggaaggcataccctaccaacggaagccgtcttt 244
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 385 tgctgaatgtagcttgcaaatgtcttaggaaggcatacc-taccaacggaagccgtcttt 443
Query: 245 gcccacagtccaggttgaaagcacaacagcccctttctcatagtggtgagaaccaaaggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 gcccacagtccaggttgaaagcacaacagcccctttctcatagtggtgagaaccacaggt 503
Query: 305 atacatccctttgcttcagatctgtggatctctaatgtctgaaagtccatgtgacatcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atacatccctttgcttcagatctgtggatctctaatgtctgaaagtccatgtgacatcct 563
Query: 365 gaccccaattcagtaaagggacaaataactttgcaaacaccaagtggctcttctaaaaca 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaccccaattcagtgaagggacaaataactttgcaaacaccaagtggctcttctaaaaca 623
Query: 425 aggcctaagagagagactgctgacctcagacctaggaagaggccagagcaactctctggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggcctaagagagagactgctgacctcagacctaggaagaggccagagcaactctctggg 683
Query: 485 tagtcagcgatgatggctggagccaaggggaaagcagacga 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tagtcagcgatgatggctggagccaaggggaaagcagacga 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 924
Length adjustment: 10
Effective length of query: 515
Effective length of database: 914
Effective search space: 470710
Effective search space used: 470710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_a10.g1 MSMg01no383_a10.g1 CHROMAT_FILE:
MSMg01no383_a10.g1 PHD_FILE: MSMg01no383_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:57 2005
(307 letters)
>mm_chr9_34826750_34827456
Length = 707
Score = 563 bits (291), Expect = e-165
Identities = 304/313 (97%), Gaps = 8/313 (2%)
Strand = Plus / Minus
Query: 1 aatttctcagttttccagcagagggcaaacttgcctaagaaattgggtatctgttgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aatttctcagttttccagcagagggcaaacttgcctaagaaattgggtatctgttgggcc 407
Query: 61 acgaaggaaaggaaagtggcgctgttccttcaccaagggtgggaattaccttgcaaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acgaaggaaaggaaagtggcgctgttccttcaccaagggtgggaattaccttgcaaaagg 347
Query: 121 gatgtctggctagctgagctcatagcctaatcctatacaggtcctagaagatcctctagc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatgtctggctagctgacctcatagcctaatcctatacaggtcctagaagatcctctagc 287
Query: 181 ttactgtcttgtttttctccacatacacaaccagccaggccagttgaaaccacagctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttactgtcttgtttttctccacatacacaaccagccaggccagttgaaaccacagctcca 227
Query: 241 aacctgactcagtattatcccaatcagtgtgtgtgtgtgtgtgtgtgtgtgt-------- 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aacctgactcagtattatcccaatcagtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgc 167
Query: 293 gtgtgtgtgtgtg 305
|||||||||||||
Sbjct: 166 gtgtgtgtgtgtg 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
