Query= MSMg01no386_i10.b1 MSMg01no386_i10.b1 CHROMAT_FILE:
MSMg01no386_i10.b1 PHD_FILE: MSMg01no386_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:21 2005
(666 letters)
>mm_chr9_28317500_28318566
Length = 1067
Score = 1160 bits (600), Expect = 0.0
Identities = 648/666 (97%), Gaps = 5/666 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtgagc---ttcctatcaagattgggtgtttgagggcaaggaaatgtcattt 60
|||||||||||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtgagcaaa--catatcaagattggatgtttgagggcaaggaaatgtcattt 261
Query: 61 tctctatgacttggagtctcttatctacttatatatctataagagtagttaaaattctag 120
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 262 tctctatgacttggagtctcttatctacttatctatctataagagtagctaaaattctag 321
Query: 121 gttgaatgggaaataatgctctgagaggcaagttaagaaagcttggctgcaactacacaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 322 gttgaatgggaaataatgctctgagaggcaagttaagagagcttggctgcaactacacaa 381
Query: 181 gtgaacagggtcctcttgaaattgccaaggtcaccttggaactgttctggccggtcatgc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgaacagggtcctcttgaaactgccaaggtcaccttggaactgttctggccggtcatgc 441
Query: 241 tatttaagtaggcatcactggtctatgaacaatactgagattaacagtaagggagaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tatttaagtaggcatcactggtctatgaacaatactgagattaacagtaagggagaacac 501
Query: 301 aggatcacacgctgctggatgtgcctgtaagggcacacagatatgctgcttgcattctct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 502 aggatcacacgctgctggatgtgcctgtaagggcacacagatatgctgcttgcattcttt 561
Query: 361 gacgtggctttgcattttctttctgacttgccatgcactggggtgacttctctaggtgtg 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gacgtggctttgcattttctctctgacttgccatgcactggggtgacttctctaggtgtg 621
Query: 421 ttcaaaggaaactgtcactattccactcggcctgggaggttagaaagttccgaagataag 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttcaaaggaagctgtcactattccactcggcctgggaggttagaaagttccgaagataag 681
Query: 481 aaactgttcctgacgtgcaatgcaccatgaaatatgtttgaaaataatgttgttaatgac 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaactgttcctgatgtgcaatgcaccatgaaatatgtttgaaaataatgttgttaatgac 741
Query: 541 aattgtcatcaaaaatttgctctcctcaaatacatttttcatagtttccaggccaacaag 600
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aattatcatcaaaaatttgctctcctcaaatacatttttcatagtttccaggccaacaaa 801
Query: 601 agtgccttggattgaaatttcagacgcttggctaactgtgtgacagacaagagggcatgc 660
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 802 agtgccttggattgaaatttcagacacttggctaactgtgtgacagacaagagggcatgc 861
Query: 661 ttaatg 666
||||||
Sbjct: 862 ttaatg 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space: 693392
Effective search space used: 693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_i10.g1 MSMg01no386_i10.g1 CHROMAT_FILE:
MSMg01no386_i10.g1 PHD_FILE: MSMg01no386_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:21 2005
(634 letters)
>mm_chr9_28491542_28492578
Length = 1037
Score = 1147 bits (593), Expect = 0.0
Identities = 625/637 (98%), Gaps = 3/637 (0%)
Strand = Plus / Minus
Query: 1 aggtaagagactaaaagtatggagccacttgctctcttgtagagtacgttaatactctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 aggtaagagactaaaagtatggagccacttgctctcttgtagagtacgttaatactctgc 778
Query: 61 attaaatttcctctggccccaaactatgagtattactcatggagggcaaggtttgaatgt 120
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 777 attaaatttcctctggccccaaactatgagtaatactcatggagggctaggtttgaatgt 718
Query: 121 tgctatgttagggtaatgggttatgataaactgaaagagattaaaagacttgatagcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgctatgttagggtaatgggttatgataaactgaaagagattaaaagacttgatagcacc 658
Query: 181 actaattcatcctttaagtaagtacaattgcgcttctgctcacagtaccaggatgtgtga 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 actaattcatccttcaagtaagtacaattgcgcttctgctcacagtaccaggatgtgtga 598
Query: 241 gaagagacttttgtgtgtattggagctgttggctgactagcttcttaggacataggctga 300
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 597 gaagagacttctgtgtgtattggagctgttggctgactggcttcttaggacataggctga 538
Query: 301 gaccactgtgcaaatt---gagaacaaaacagacatttcattttccacctccacaccagc 357
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 537 gaccactgtgcaaattgaggagaacaaaacagacatttcattttctacctccacaccagc 478
Query: 358 aatgatgctacaagcgggctttaaatgtgtctcagtttatttaattccagtgcaaacaag 417
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 477 aatgatgctacaagcgagctttaaatgagtctcagtttatttaattccagtgcaaacaag 418
Query: 418 gcagacgacagacccaggccctgccacttcttttcctggcttctgcttctgtacatatct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcagacgacagacccaggccctgccacttcttttcctggcttctgcttctgtacatatct 358
Query: 478 ccagagcagatgccaagactggcagcaccttcctggatcgtgtcagaactgtgcttcaat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccagagcagatgccaagactggcagcaccttcctggatcgtgtcagaactgtgcttcaat 298
Query: 538 ccaaaacaagccagcatgctctgcaagcctggactgcaatggaagacagggggatgtcct 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ccaaaacaagccagcatgctctgcaagcctggactgcaatggaagacagggggatgtcct 238
Query: 598 tttggcagacacatcaaccacctttggtgctggcaag 634
||||||||||||||||||||||||||| |||||||||
Sbjct: 237 tttggcagacacatcaaccacctttggcgctggcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1037
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1027
Effective search space: 640848
Effective search space used: 640848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
