NNNCCATTAGTCCTACATGTCANNAANAGANTCACCATAGTCCACAGAAC
GCGCGGAANNNAGCCGGGCTGCTTCACCCGCGCGAGGATANCCTCNCGNC
TGCCCATCCCAGAAGCTGATGGATATACATCCCCAGGCTGTTAGCTGATG
TCAGGATAAGGGAGCGGCAGACTTCCCGGAGGGCCTCTCAGCCGTTGGAA
ATCAGAGCTACTAGAGAAGAAAGGCGTGTGCATTTTTACTTGATATTAGC
CCTAGCGAAGCAACAGCTATAAAACATGCCCCTGGAAATGTATCAAGAGA
AGAAACCACCTTGGTTTTTGTTTGCTTGTTGTTGTTGCTCGCGCCGCCGC
TGCTGCCACTGCTCTTGTTTTTTTTCCCCACCCACGGGGGGGGGGGGGCC
CCCAACTACCCTCGGCCCTCTCCCCCCCCCCCACCGCGCCCCCTCTTCCC
TCTCCCGACCCCCCCCGCCCCCCACCCCCCCCCTTCGCCCCCCTCTCCTC
CCCCGCCCCTCTGCCCCCCTCCCCCCCCCCTCCACCCCACCTCCCTCCCT
CCCTCTTCCCGGCCCCCTCCGTTTCCCGCCTACCCCCTCCCCCCCCCCTT
CCCCTCCCCCCGCCCTCCCCTCCCCTTCCCCCCCCCCCCTCCCTCCCTCG
CCTCCCCTCTCCCCGTCCCCCCTCCCCACCCCTTCTCTCCCCCTCTTCTT
TTCCCTTCCCCCTTCTTCCCCCCCCCCCCCCCCCCCCCTCCTCCCCCTCC
CCTCCCCCCTTCCTTCCCTTCCCACCCCCCTCCCTCCCTTCCC

NNNNNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAATTGTAATGGCAC
ATTCAGTCCAAACAGGAGTAGCAGATCCATTGCAGCATAGCAAAATACAG
AAAAATAAAAGTTACTTACATGTAACTCAACAAATTAAAAGTAAATTAAT
AAATTAAAATAAATTTGGAGACAGACTCAATATGCATGTACAAGTAATAT
TCTCACATTTCCAGTCTTAACTTTTAATAAGAGTCCAGTTACTATACTAT
GTACCTGGAATCTTACAGGAAATGCTGGGGAAAATGTAGAGATACGAAGT
TCAGGAAGGTGTACTATGAATTTCATATTGTTGTCAGTCAATATCCGAGT
TTAGACAAACACAAACATTTTAGTTAATAGCTTTTCATACAATGCTAAAT
TCAAAATCTATGAATTCAGAGATAAAAGACATATAGATTGTAACTAAAGA
TGATAAGCCATAACACACAGGAAAAATTAAGTAAACTATAGGCTGTAAAA
ACTGAGACAACTTAAGGAACACATAANAAAATCACATTAGGATAAACTCC
CTGGTGAAGGCTCAAGTTTACACTTGTACNACGTACTTCATGAAGCAGGT
AAAGGCTTCTAGTAGGTTATACTTAATAAAGTAAAGCAAAATTTCCAAAA
TTGTCCCCCCCATGCTTGGCCGTGCTGTTTGCAAAAATCTGGAAAGTTAA
AAAAAA

Query= MSMg01no389_p24.g1 MSMg01no389_p24.g1 CHROMAT_FILE:
MSMg01no389_p24.g1 PHD_FILE: MSMg01no389_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:46 2005
         (481 letters)



>mm_chr9_25070891_25071771
          Length = 881

 Score =  907 bits (469), Expect = 0.0
 Identities = 478/481 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaattgtaatggcacattcagtccaaacaggagtagcagatccattgcagcatagcaaa 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 caaattgtaatggcgcattcagtccaaacaggagtagcagatccattgcagcatagcaaa 754

                                                                       
Query: 61  atacagaaaaataaaagttacttacatgtaactcaacaaattaaaagtaaattaataaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 atacagaaaaataaaagttacttacatgtaactcaacaaattaaaagtaaattaataaat 694

                                                                       
Query: 121 taaaataaatttggagacagactcaatatgcatgtacaagtaatattctcacatttccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 taaaataaatttggagacagactcaatatgcatgtacaagtaatattctcacatttccag 634

                                                                       
Query: 181 tcttaacttttaataagagtccagttactatactatgtacctggaatcttacaggaaatg 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcttaacttttaataaaagtccagttactatactatgtacctggaatcttacaggaaatg 574

                                                                       
Query: 241 ctggggaaaatgtagagatacgaagttcaggaaggtgtactatgaatttcatattgttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctggggaaaatgtagagatacgaagttcaggaaggtgtactatgaatttcatattgttgt 514

                                                                       
Query: 301 cagtcaatatccgagtttagacaaacacaaacattttagttaatagcttttcatacaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cagtcaatatccgagtttagacaaacacaaacattttagttaatagcttttcatacaatg 454

                                                                       
Query: 361 ctaaattcaaaatctatgaattcagagataaaagacatatagattgtaactaaagatgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctaaattcaaaatctatgaattcagagataaaagacatatagattgtaactaaagatgat 394

                                                                       
Query: 421 aagccataacacacaggaaaaattaagtaaactataggctgtaaaaactgagacaactta 480
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aagccataacacaaaggaaaaattaagtaaactataggctgtaaaaactgagacaactta 334

            
Query: 481 a 481
           |
Sbjct: 333 a 333


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)