Query= MSMg01no390_a09.b1 MSMg01no390_a09.b1 CHROMAT_FILE:
MSMg01no390_a09.b1 PHD_FILE: MSMg01no390_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:48 2005
(245 letters)
>mm_chr9_61102754_61103399
Length = 646
Score = 420 bits (217), Expect = e-122
Identities = 239/247 (96%), Gaps = 3/247 (1%)
Strand = Plus / Plus
Query: 1 tgtgaaagacacgaggaccttctgtgtagagtctgt--cgggggtataacagaagaaacc 58
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 201 tgtgaaagacacgaggaccttctgtgtagagtctgttgggggggtataatagaagaaacc 260
Query: 59 tagcccttccttcaggaacttaatccctagggcaggagacggattcactaaacaagcaga 118
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 261 tagcccttccttcaggaacttaatccctagggcaggagac-aattcagtaaacaagcaga 319
Query: 119 acagaagatgaactataaacacctcaaccgacactaaaataacacactatagaaagcagg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acagaagatgaactataaacacctcaaccgacactaaaataacacactatagaaagcagg 379
Query: 179 agcaaagagagctgacgccactgggattatgtaatctgactgtgagggactgatggtcaa 238
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcaaagagagctgaagccactgggattatgtaatctgactgtgagggactgatggtcaa 439
Query: 239 gaagata 245
|||||||
Sbjct: 440 gaagata 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_a09.g1 MSMg01no390_a09.g1 CHROMAT_FILE:
MSMg01no390_a09.g1 PHD_FILE: MSMg01no390_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:48 2005
(248 letters)
>mm_chr9_61279452_61280099
Length = 648
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 cccaacaagaactgaaagaggaagctgaacggggcggtggagctggggagggtggggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cccaacaagaactgaaagaggaagctgaacggggcggtggagctggggagggtggggagg 332
Query: 61 gctgccatgcaaaatccaggcacctggctctgggtacctagcttgagcaactggttcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gctgccatgcaaaatccaggcacctggctctgggtacctagcttgagcaactggttcctc 272
Query: 121 tgttctgcaattgcactgggcactggggacaccaagtctgcttccacgcaacttctagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 tgttctgcaattgcactgggcactggggacaccaagtctgcttccacgaaacttctagtt 212
Query: 181 cattctctgtgctctctgggcctcagtttctccgtctgtaacaaagaggtcagaccagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cattctctgtgctctctgggcctcagtttctccgtctgtaacaaagaggtcagaccagat 152
Query: 241 taggatt 247
|||||||
Sbjct: 151 taggatt 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
