Query= MSMg01no391_p21.b1 MSMg01no391_p21.b1 CHROMAT_FILE:
MSMg01no391_p21.b1 PHD_FILE: MSMg01no391_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:23 2005
(344 letters)
>mm_chr9_66220793_66221536
Length = 744
Score = 598 bits (309), Expect = e-175
Identities = 330/343 (96%), Gaps = 11/343 (3%)
Strand = Plus / Plus
Query: 2 tgctcttaactgctgagccatctctccagcccagcagntttttttttttttttttttttt 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 213 tgctcttaactgctgagccatctctccagcccagcag---------tttttttttttttt 263
Query: 62 taaaaagcatctctgatctcatcctttccatttttttgcagtctggcctcaaaaacttga 121
||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 taaaaagcatctccgatctcatcctttccatttttttgcagtctggcctcaaa--cttga 321
Query: 122 tatgtagctgtgactggccctgaattcctgatccttctgcttctacctcccaagtgctac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatgtagctgtgactggccctgaattcctgatccttctgcttctacctcccaagtgctac 381
Query: 182 aattacaagtgtgcaccaccatagcaggcctttttctggttttcaaaaattatgtactat 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 aattacaagtgtgcaccaccatagcaggcctttttctagttttcaaaaattatgtactat 441
Query: 242 atttcaagtattattttaggacctgaggatgcaaccctagagatacaatttctgctctta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atttcaagtattattttaggacctgaggatgcaaccctagagatacaatttctgctctta 501
Query: 302 ctaagttcacatcgtgctagggtgatcaggaaagaaattcata 344
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctaagttcacatcgtgctagggtgatcaggaaagaaattcata 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_p21.g1 MSMg01no391_p21.g1 CHROMAT_FILE:
MSMg01no391_p21.g1 PHD_FILE: MSMg01no391_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:23 2005
(398 letters)
>mm_chr9_66377637_66378433
Length = 797
Score = 733 bits (379), Expect = 0.0
Identities = 394/399 (98%), Gaps = 2/399 (0%)
Strand = Plus / Minus
Query: 1 actgtctgcaagtaacaaatgctgcatgtaagactccgcttacttctactttagaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtctgcaagtaacaaatgctgcatgtaagactccgcttacttctactttagaaccct 382
Query: 61 cagaaatgtcttctggtattgctgtgtgtcattttttttcttgtcccttactatgaacaa 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 cagaaatgtcttctggtattgctgtgtgtca-tttttttcttgtcccttactatgaacaa 323
Query: 121 atcttttgtcttgtttattaacacgcctatagattaacagcctgaaacatacactgatat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcttttgtcttgtttattaacaagcctatagattaacagcctgaaacatacactgatat 263
Query: 181 gagtatttgttttgttgagaaagaaattattatttcagtctggattctaattatttac-t 239
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 262 gagtatttgttttgttgagaaaaaaattattatttcagtctggattctaattatttactt 203
Query: 240 tttttttttttttttaatgacagctttactgtctcgcccttggctagcctggaactcaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tttttttttttttttaatgacagctttactgtctcgcccttggctagcctggaactcaca 143
Query: 300 gagtatgcctgcctcttgcatgttggcaccatgctcagcctttttctgttgctagtatta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gagtatgcctgcctcttgcatgttggcaccatgctcagcctttttctgttgctagtatta 83
Query: 360 tctatgcaggattctttaactaggagagggagttataag 398
||||||||||||||||||||||||||||||| |||||||
Sbjct: 82 tctatgcaggattctttaactaggagagggatttataag 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 797
Length adjustment: 9
Effective length of query: 389
Effective length of database: 788
Effective search space: 306532
Effective search space used: 306532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
