Query= MSMg01no392_d12.b1 MSMg01no392_d12.b1 CHROMAT_FILE:
MSMg01no392_d12.b1 PHD_FILE: MSMg01no392_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:40 2005
(534 letters)
>mm_chr9_59045916_59046850
Length = 935
Score = 1009 bits (522), Expect = 0.0
Identities = 528/530 (99%), Gaps = 1/530 (0%)
Strand = Plus / Minus
Query: 6 gaattctcct-ttaccctctctaagagttctgcttctttctacagagcactccctgacgc 64
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaattctcctcataccctctctaagagttctgcttctttctacagagcactccctgacgc 676
Query: 65 attacttgctcaagaaccccacccacccacgtctctggtttcttttttaagtgagggaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 attacttgctcaagaaccccacccacccacgtctctggtttcttttttaagtgagggaga 616
Query: 125 agagaaatgaattgtgggagtaacgttggtgctctaagcagcattccagctgggctcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agagaaatgaattgtgggagtaacgttggtgctctaagcagcattccagctgggctcatg 556
Query: 185 tgttccacgtgtcctgggtggcctgaactatgaattgatggatcctgcaggagtacagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgttccacgtgtcctgggtggcctgaactatgaattgatggatcctgcaggagtacagga 496
Query: 245 aacagagacaccagggatatggagctctactgcctgggcagaagtttctttcttccactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aacagagacaccagggatatggagctctactgcctgggcagaagtttctttcttccactg 436
Query: 305 atttagcactgatccaaggaccattaattactgtgacagtgctgggctggacagcaacct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atttagcactgatccaaggaccattaattactgtgacagtgctgggctggacagcaacct 376
Query: 365 tgcttacccctttcgatttgtgccctaacctaatggagttggatctggcagatgctgagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgcttacccctttcgatttgtgccctaacctaatggagttggatctggcagatgctgagg 316
Query: 425 ctccaggagcaggctgagaaggggaggggacagggcaggggctgagcagcttattttctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctccaggagcaggctgagaaggggaggggacagggcaggggctgagcagcttattttctt 256
Query: 485 cccaggaggcaggggaatccagggtttgaagggagaaacacccatgttca 534
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cccaggaggcaggggaatccagggtttgaagggagaaacacccatgttca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d12.g1 MSMg01no392_d12.g1 CHROMAT_FILE:
MSMg01no392_d12.g1 PHD_FILE: MSMg01no392_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:40 2005
(423 letters)
>mm_chr9_58859894_58860716
Length = 823
Score = 803 bits (415), Expect = 0.0
Identities = 421/423 (99%)
Strand = Plus / Plus
Query: 1 ccactgccagtgtatttgaggtagtgggagttagaacgaacctaggtattcataccctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccactgccagtgtatttgaggtagtgggagttagaacgaacctaggtattcataccctag 260
Query: 61 gtaagaaggctcacactatgaagcactgagcagtaattagaggaaacttactagatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaagaaggctcacactatgaagcactgagcagtaattagaggaaacttactagatgtat 320
Query: 121 tcgtagcaatatggccatatccttaaaacaccatgttgggcagaaggaaaagaacataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgtagcaatatggccatatccttaaaacaccatgttgggcagaaggaaaagaacataat 380
Query: 181 aaaaaagacattacgaaaattacctcttaatcctcttaataaccctataattttattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaagacattacgaaaattacctcttaatcctcttaataaccctataattttattttc 440
Query: 241 ctcatttttatttgtcacgaaataaaaattactaacttttctatggtcatacatctaatg 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcatttttataggtcacgaaataaaaattactaacttttctatggtcatacatctaatg 500
Query: 301 acttacaggataagataagtaccacaagttaaaacaaacaaaatgactcatgttatgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttacaggataagataagtaccacaagttaaaacaaacaaaatgactcatgttatgtat 560
Query: 361 gtgctgcacacctaagattcctttgactagtgactgaggctggtgatatggctcacctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgctgcacacctaagattcctttgactagtgactgaggctggtgatatggctcacctga 620
Query: 421 gtt 423
|||
Sbjct: 621 gtt 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
