Query= MSMg01no392_d16.b1 MSMg01no392_d16.b1 CHROMAT_FILE:
MSMg01no392_d16.b1 PHD_FILE: MSMg01no392_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(536 letters)
>mm_chr9_76052840_76053775
Length = 936
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%)
Strand = Plus / Minus
Query: 137 ctccttggtattctggctcttgtacaccttgccctcttatatgatagtccctgagctata 196
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 936 ctccttggtattctggctcttgtacaccttgccctcttacatgatagtccctgagctata 877
Query: 197 gatgcaggagctgtgatataagtgtttccgttgaatctgggatccgctggggctgggatc 256
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 876 gatgcaggagctgtgatataagtgtttccgttgaagctgggatccgctggggctgggatc 817
Query: 257 ctcgtgatccattgatctctggattgtgtccaattgtggttttcagtgatattctccatt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ctcgtgatccattgatctctggattgtgtccaattgtggttttcagtgatattctccatt 757
Query: 317 tactgtaaagagaatcgtcttgcgaatcagcagttaagaacctggcactttgagcattgt 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 756 tactgtaaagagaatcgtcttgcgaatcagcagttaagaacctggcactttgagtattgt 697
Query: 377 ccccataacaaacttaatattcatattaaaatgcatcccataggcaatagtattctcatt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ccccataacaaacttaatattcatattaaaatgcatcccataggcaatagtattctcatt 637
Query: 437 tcttgttaaaaatctgggaggggtggttacttttatgaagaatcgttagaaaaacaagat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcttgttaaaaatctgggaggggtggttacttttatgaagaatcgttagaaaaacaagat 577
Query: 497 aatctcactaaactcattgatttcttgcgttgatatatta 536
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 576 aatctcactaaactcattgatttcttgggttgatatatta 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d16.g1 MSMg01no392_d16.g1 CHROMAT_FILE:
MSMg01no392_d16.g1 PHD_FILE: MSMg01no392_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(401 letters)
>mm_chr9_75890328_75891128
Length = 801
Score = 700 bits (362), Expect = 0.0
Identities = 392/406 (96%), Gaps = 7/406 (1%)
Strand = Plus / Plus
Query: 1 catgggatgtgatttctgaagattccaatagattttgagaccaacaaacttttctgtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 catgggatgtgatttctgaagattccaatagattttgagaccaacaaacttttctgtgac 253
Query: 61 a-------cagtgcctttagaataagtgtctcaccccataataatgacatagtgaacaac 113
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attacccacagtgcctttagaataagtgtctcaccccataataatgacatagtgaacaac 313
Query: 114 tgggttgcgtagaggtttgttcaagccccttgtgcccaagctgtgggtcatttgaatacc 173
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 314 tgggttgcgtagaggtttgttcaagccccttgtgcccaagctgtgtgtcatttgaatacc 373
Query: 174 tggtcattgaaattcttcttatcataggaggctctgcatttaaaaagttagagtttaccc 233
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 374 tggtcattgaaattctccttatcataggaggctctgcatttaaaaagatagagtttaccc 433
Query: 234 tggagagccagacatttgggcaaagcacttgctgtggaattatgaggatgcgagtctgaa 293
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 434 tggagagccagacaagtgggcaaagcacttgctgtggaattatgaggatgcaagtctgaa 493
Query: 294 tcagtgggagtggcataaacacagactggataatgcatttctgcaagagacagaagaatc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcagtgggagtggcataaacacagactggataatgcatttctgcaagagacagaagaatc 553
Query: 354 cctgggaacttgtgggccagattgcctggcgtacatggtagtggac 399
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cctgagaacttgtgggccagattgcctggcgtacatggtagtggac 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
