Query= MSMg01no393_h04.b1 MSMg01no393_h04.b1 CHROMAT_FILE:
MSMg01no393_h04.b1 PHD_FILE: MSMg01no393_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:23 2005
(543 letters)
>mm_chr9_120491177_120492126
Length = 950
Score = 973 bits (503), Expect = 0.0
Identities = 527/539 (97%), Gaps = 9/539 (1%)
Strand = Plus / Minus
Query: 13 gaattcattaatgtgcgttcacgtggtgccacctactggtgagaaggagctcgagg---- 68
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gaattcattaatgtgtgttcacgtggtgccacctactggtgagaaggagctcgaggaagt 691
Query: 69 ---aagctaaagctgcaggggggaggccgagaaggactgacaaccgtgaaagtcttcact 125
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 690 gctaagctaaagctgcagggggaaggccgagaagaactgacaaccgtgaaagtcttcact 631
Query: 126 gtgggagcacggccctgggagacacacgcgctaactgggcagatgaagagggtatttcaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtgggagcacggccctgggagacacacgcgctaactgggcagatgaagagggtatttcaa 571
Query: 186 atgcagcccaggaaccaaccagcacagctggaggaaaggggggaagaggcacagctgcag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atgcagcccaggaaccaaccagcacagctggaggaaaggggggaagaggcacagctgcag 511
Query: 246 gaggggctcgcggctcctgcagaggaatctgagctgaggtggagggagtccctggggatc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaggggctcgcggctcctgcagaggaatctgagctgaggtggagggagtccctggggatc 451
Query: 306 accctgagtcagctccatctccaccaggtacagtttgaggtgctggagaaaactcctgta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 accctgagtcagctccatctccaccaggtacagtttgaggtgctggagaaaactcctgta 391
Query: 366 ccatctgaaagctctccggcacttcttgcattcacacagcttctccgcagagtgaacaat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccatctgaaagctctccggcacttcttgcattcacacagcttctccgcagagtgaacaat 331
Query: 426 ctggtgctggaggaaggccacgcccctccggaaggccctaaggctctccttgcagacgtc 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctggtgctggaggaaggccacgcccctccggaaggccctaaggctctccttgcagacgt- 272
Query: 486 a-ggcttctctctggtgtctatcatccagtcctgggttaaggccccgctagaactcaga 543
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agggcttctctctggtgtctatcatccagtcctgggttaaggccccgctagaactcaga 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 950
Length adjustment: 10
Effective length of query: 533
Effective length of database: 940
Effective search space: 501020
Effective search space used: 501020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_h04.g1 MSMg01no393_h04.g1 CHROMAT_FILE:
MSMg01no393_h04.g1 PHD_FILE: MSMg01no393_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:23 2005
(529 letters)
>mm_chr9_120312419_120313347
Length = 929
Score = 988 bits (511), Expect = 0.0
Identities = 520/523 (99%)
Strand = Plus / Plus
Query: 7 ggtctagagctgaggtctgcttagagggacagcagagcagccccaggtgagcttatctga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggtctagagctgaggtctgcttagagggacagcagagcagccccaggtgagcttatctga 266
Query: 67 ggacagctgaggacatacatgcggttccaccacccagccttctccatcctctgcctccat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggacagctgaggacatacatgcggttccaccacccagccttctccatcctctgcctccat 326
Query: 127 tctgcaaagctagaagaccagcaggaatgtgaccctggacagaggcagccacatttttaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctgcaaagctagaagaccagcaggaatgtgaccctggacagaggcagccacatttttaa 386
Query: 187 aagaggaactgttctttgccagttaaaatgacagctatacaaaaaatctgggtgttctga 246
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 387 aagaggaactgttctttgccagttaaaatgacagctataccaaaaatctgggtgttctga 446
Query: 247 gctgtgatttgccagggctcctgcagtttggcaaagcccctgtttaccgtttggatgaag 306
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gctgtggtttgccagagctcctgcagtttggcaaagcccctgtttaccgtttggatgaag 506
Query: 307 aaaacaccccacccagcctgcctcctacttcttaccctccagatcagctcatttttagta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaaacaccccacccagcctgcctcctacttcttaccctccagatcagctcatttttagta 566
Query: 367 tctgtagacctgccaagaacccaggcgggtgtggggaaagatagctcgtctgttgctatg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctgtagacctgccaagaacccaggcgggtgtggggaaagatagctcgtctgttgctatg 626
Query: 427 gaggccctcagcttctcaaggcccaggcctggaattgctgactttgtagatgcatccctc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaggccctcagcttctcaaggcccaggcctggaattgctgactttgtagatgcatccctc 686
Query: 487 cgccgccctggaggaagcagagggatggtgactcttctgtatt 529
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cgccgccctggaggaagcagagggatggtgactcttctgtatt 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
