Query= MSMg01no396_h10.b1 MSMg01no396_h10.b1 CHROMAT_FILE:
MSMg01no396_h10.b1 PHD_FILE: MSMg01no396_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:35 2005
(331 letters)
>mm_chr9_71492302_71493034
Length = 733
Score = 594 bits (307), Expect = e-174
Identities = 326/333 (97%), Gaps = 2/333 (0%)
Strand = Plus / Plus
Query: 1 catgtgtgtttctggtttagggtcattccactctcacaaattattcctctttagcaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgtgtttctggtttagggtcattccactctcacaaattattcctctttagcaattc 260
Query: 61 aggttttcctgtcatc--agaagtcctggtatttctttgtgtgggtttctctcaagtgtt 118
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttttcctgtcatctcagaagtcctggtatttctttgtgtgggtttctctcaagtgtt 320
Query: 119 gagtattaggcttgtaaatactcacccccagctggtaactgctttgggcagttgcagaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtattaggcttgtaaatactcacccccagctggtaactgctttgggcagttgcagaca 380
Query: 179 gactatcttgggactgggaaatggcaatgaattggaccacagtttgctgatagctctggc 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gactatcttgggactgggaaatggcaatgaattggaccacagtttgctgataactctggc 440
Query: 239 aatgatacatattcactcaggaagatgggccaggaatgaaactggactatgtggtttggt 298
||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 441 aatgatacatacacactcaggaagatgggccaggaatgagactggactctgtggtttggt 500
Query: 299 cagtggtccccgatgtgcagggtggtttggggt 331
|||||||||||||||||||||||||||||||||
Sbjct: 501 cagtggtccccgatgtgcagggtggtttggggt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 733
Length adjustment: 9
Effective length of query: 322
Effective length of database: 724
Effective search space: 233128
Effective search space used: 233128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_h10.g1 MSMg01no396_h10.g1 CHROMAT_FILE:
MSMg01no396_h10.g1 PHD_FILE: MSMg01no396_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:36 2005
(243 letters)
>mm_chr9_71667220_71667862
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 tcattcaaaccatcgcagcttgtgtcaagttgacaaagtactcagtgtatccgtggtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcattcaaaccatcgcagcttgtgtcaagttgacaaagtactcagtgtatccgtggtggt 384
Query: 61 gctactgagaggttggagaacctttaggaggtgactgctatagagaggagttatatagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctactgagaggttggagaacctttaggaggtgactgctatagagaggagttatatagag 324
Query: 121 aggagttaggtcactggaggaatgccctttaaggggatgaagggattcaacctccctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggagttaggtcactggaggaatgccctttaaggggatgaagggattcaacctccctctc 264
Query: 181 tcctatctcctgattgccatgaggtaagcaccttagctttaccaggtactcgtgacataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcctatctcctgattgccatgaggtaagcaccttagctttaccaggtactcgtgacataa 204
Query: 241 agc 243
|||
Sbjct: 203 agc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
