Query= MSMg01no397_b15.b1 MSMg01no397_b15.b1 CHROMAT_FILE:
MSMg01no397_b15.b1 PHD_FILE: MSMg01no397_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:25 2005
(489 letters)
>mm_chr9_92554885_92555773
Length = 889
Score = 882 bits (456), Expect = 0.0
Identities = 478/488 (97%), Gaps = 6/488 (1%)
Strand = Plus / Plus
Query: 5 gaattccatacaat---ttcccttgatcagattcacccctctttccaagtcttccttcct 61
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatacaatgtatt---ttgatcagattcacccctctttccaagtcttccttcct 261
Query: 62 actcactcatatgtatttgtttctttttcaaaacctgtcaataacttacagagatgccca 121
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actcactcatatgtatgtgtttctttttcaaaacctgtcaataacttacagagatgccca 321
Query: 122 tatactcttgaaggcaaaacctcccactggagagtggtcagtctaccagagaccttaccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatactcttgaaggcaaaacctcccactggagagtggtcagtctaccagagaccttaccc 381
Query: 182 ttaaaaatttgtttccttgattccagaagttatctatcaccaaacactactaagcctagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttaaaaatttgtttccttgattccagaagttatctatcaccaaacactactaagcctagg 441
Query: 242 gtggaattttgtgcccaaatgctgagggattcaattgtttttgacaaatgtatgcacatt 301
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 gtggaattttgtgcccaaatgctgagggattcaattgattttgacaaatgtatgcacatt 501
Query: 302 catgccacagagggtattttcataagctgggaacataacctctgcttcctgatgagttct 361
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 502 catgccacagagggtattttcagaagctgggaacataacctctgcttcctgatgagttct 561
Query: 362 atcaacgttgatgctaaattcatctgtctatgatgcttgagttcatcttgtccttgtgac 421
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atcaatgttgatgctaaattcatctgtctatgatgcttgagttcatcttgtccttgtgac 621
Query: 422 gctgcatacacagatgggatcttacaacacctgttgtagcatgtttatattcacatcaac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctgcatacacagatgggatcttacaacacctgttgtagcatgtttatattcacatcaac 681
Query: 482 atatgaat 489
||||||||
Sbjct: 682 atatgaat 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_b15.g1 MSMg01no397_b15.g1 CHROMAT_FILE:
MSMg01no397_b15.g1 PHD_FILE: MSMg01no397_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:25 2005
(416 letters)
>mm_chr9_92715108_92715923
Length = 816
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Minus
Query: 1 agtccttgacctgatgaaaatagcttttctccatgttggcggtgttgaaatatgatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agtccttgacctgatgaaaatagcttttctccatgttggcggtgttgaaatatgatcaag 557
Query: 61 ggagctgcatgcctgagccccttccaaattcctccatctcccaacgtgccaagcgtgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggagctgcatgcctgagccccttccaaattcctccatctcccaacgtgccaagcgtgacc 497
Query: 121 gtgagactccttcctcctccttcctcttgcttacttagcttaagacaacctgatgacaaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 496 gtgagactccttcctcctccttcctcttgcttacttagtttaagacaacctgatgacaaa 437
Query: 181 gacttcagtgtttgtaatataaagatatgaatctacagttgcccgcaattttatgaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 436 gacttcagtgtttgtaatataaagatatgaatctacagttgcccgcaattttatgaacgg 377
Query: 241 tttcttaataaaattagtaaaggaaatacattaaatttcctttgaaatagtctgttacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttcttaataaaattagtaaaggaaatacattaaatttcctttgaaatagtctgttacga 317
Query: 301 gataaaagtttttacatgaatgatcgacttatttttgcagtcagaacatattaatcactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gataaaagtttttacatgaatgatcgacttatttttgcagtcagaacatattaatcactt 257
Query: 361 gatgtgaaatggtcttatattcctcttaaagagtttcaaagaggcatttggaagag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gatgtgaaatggtcttatattcctcttaaagagtttcaaagaggcatttggaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
