Query= MSMg01no397_p05.b1 MSMg01no397_p05.b1 CHROMAT_FILE:
MSMg01no397_p05.b1 PHD_FILE: MSMg01no397_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:33 2005
(249 letters)
>mm_chr9_69953717_69954365
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 acgtcataaagatgacaccagtgtgcactgtccagcggaggtgctgatagcagccatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgtcataaagatgacaccagtgtgcactgtccagcggaggtgctgatagcagccatttg 260
Query: 61 tggcccactctttccctgcctgtggcacacatgcaccttaaatctccacccgcacccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcccactctttccctgcctgtggcacacatgcaccttaaatctccacccgcacccaca 320
Query: 121 gcagcgtgacagttaatttgggttatcatcttgactggatccagctagtgggcacatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagcgtgacagttaatttgggttatcatcttgactggatccagctagtgggcacatctg 380
Query: 181 tgagggatttttctcatcagacaaccagaagtgagaagacccacactaaacatgggcagc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tgagggatttttctcatcaggcaaccagaagtgagaagacccacactaaacataggcagc 440
Query: 241 accttcctg 249
|||||||||
Sbjct: 441 accttcctg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no397_p05.g1 MSMg01no397_p05.g1 CHROMAT_FILE:
MSMg01no397_p05.g1 PHD_FILE: MSMg01no397_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:33 2005
(206 letters)
>mm_chr9_70100744_70101346
Length = 603
Score = 368 bits (190), Expect = e-106
Identities = 201/206 (97%), Gaps = 3/206 (1%)
Strand = Plus / Minus
Query: 1 agaggagggagaagagctctgctgacagctcaggaaaggttctgtgagagatggggacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agaggagggagaagagctctgctgacagctcaggaaaggttctgtgagagatggggacct 344
Query: 61 ggtgtgagcccggaagatgcagatgacttactcagccagatggaggagaggggactttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggtgtgagcccggaagatgcagatgacttactcagccagatggaggagaggggactttcc 284
Query: 121 aacagcagaagggttcccccatcactgctgggaaacagccctggctgcctagttcttctt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 283 aacagcagaagggttcccccatcactgctgggaaacagccctggcagcctagttcttctt 224
Query: 181 ctttagctcttttgtttctggagtgg 206
||| |||||||||||||||||||
Sbjct: 223 ---tagttcttttgtttctggagtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 603
Length adjustment: 8
Effective length of query: 198
Effective length of database: 595
Effective search space: 117810
Effective search space used: 117810
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
