Query= MSMg01no400_c18.b1 MSMg01no400_c18.b1 CHROMAT_FILE:
MSMg01no400_c18.b1 PHD_FILE: MSMg01no400_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:23 2005
(399 letters)
>mm_chr9_15148970_15149768
Length = 799
Score = 750 bits (388), Expect = 0.0
Identities = 397/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 1 ctggccttgaactcacagagattcacctgaagctgagattaaaggtgtgcaccatcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctggccttgaactcacagagattcacctgaagctgagattaaaggtgtgcaccatcactg 259
Query: 61 ccca-ccttactccatgatttttaagaaattcctctaaatggcaatgctgattcaactaa 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccagccttactccatgatttttaagaaattcctctaaatggcaatgctgattcaactaa 319
Query: 120 aaaggccagaatgatgactaagacataaccctagcttcctagaattcatgcatacagtga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaggccagaatgatgactaagacataaccctagcttcctagaattcatgcatacagtga 379
Query: 180 gtatgccacttaccacaccttgccactcttatctgaatatttactttcaaatacatatgc 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtatgtcacttaccacaccttgccactcttatctgaatatttactttcaaatacatatgc 439
Query: 240 tttacttaacatctattttgttttaattatgtgtatgtgcatgtgccttggaagtccaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttacttaacatctattttgttttaattatgtgtatgtgcatgtgccttggaagtccaga 499
Query: 300 aaagggtatgtgatttattagagctgtagttaaagctggttagaagtttaatgtgggtct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaagggtatgtgatttattagagctgtagttaaagctggttagaagtttaatgtgggtct 559
Query: 360 aggtactctataacagcagtcaatacttaactgctgagcc 399
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 aggtactctataagagcagtcaatacttaactgctgagcc 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_c18.g1 MSMg01no400_c18.g1 CHROMAT_FILE:
MSMg01no400_c18.g1 PHD_FILE: MSMg01no400_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:23 2005
(248 letters)
>mm_chr9_15284032_15284679
Length = 648
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Minus
Query: 1 tcatcaacaggaagtcagtcccagcctgggacttcatgattggagggaagggtcaagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcatcaacaggaagtcagtcccagcctgggacttcatgattggagggaagggtcaagttt 387
Query: 61 acctgtcacccaaaaaggtgacattgttactgagagatgagcaggatctggttgtcagtg 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 386 acctgtcacccaaaaaggtgacattgttactgagagatgagtgggatctggttgtcagtg 327
Query: 121 gtgctgaggacaagtgtctgtgaccagccagtgcaaggttcaggtagagaaagggctccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgctgaggacaagtgtctgtgaccagccagtgcaaggttcaggtagagaaagggctccc 267
Query: 181 tgtgctgctatgttaattagaaaggagatgacgcaggcctgttgtaaaggttaaataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgtgctgctatgttaattagaaaggagatgacgcaggcctgttgtaaaggttaaataaga 207
Query: 241 ggagac 246
||||||
Sbjct: 206 ggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
