Query= MSMg01no403_d01.b1 MSMg01no403_d01.b1 CHROMAT_FILE:
MSMg01no403_d01.b1 PHD_FILE: MSMg01no403_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:23 2005
(162 letters)
>mm_chr9_16826997_16827558
Length = 562
Score = 300 bits (155), Expect = 3e-86
Identities = 160/162 (98%)
Strand = Plus / Plus
Query: 1 caaagattgcttgcaaaattattctcaacaggataacagcttatgcaaatgggcaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagattgcttgcaaaattattctcaacaggataacagcttatgcaaatgggcaacaga 260
Query: 61 ttggtgggctggggaaaatcattattataatgtctaaagctcagaagtacataaaatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggtgggctggggaaaatcattattataatgtctaaagctcagaagtacataaaatata 320
Query: 121 aacaaagataanaatgtcttatcaaaactatgatataacttg 162
||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 321 aacaaagataaaaatgtattatcaaaactatgatataacttg 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no403_d01.g1 MSMg01no403_d01.g1 CHROMAT_FILE:
MSMg01no403_d01.g1 PHD_FILE: MSMg01no403_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:23 2005
(163 letters)
>mm_chr9_16967321_16967887
Length = 567
Score = 290 bits (150), Expect = 3e-83
Identities = 162/166 (97%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 1 acagtaatcctagcctgggtcctaaagtgct-aaattcc-aatgtaagccaccataccta 58
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 366 acagtaatcctagcctgggtcctaaagtgctaaaattccaaatgtaagccaccataccta 307
Query: 59 gcttcatttgactttaataagctaacctatgtcttgtttctttccaaagtctcctttata 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcttcatttgactttaataagctaacctatgtcttgtttctttccaaagtctcctttata 247
Query: 119 ttaccttaatatagttattcttactttatacataa-a-acttttca 162
||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 246 ttaccttaatatagttattcttactttatacataatatacttttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 567
Length adjustment: 8
Effective length of query: 155
Effective length of database: 559
Effective search space: 86645
Effective search space used: 86645
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
