MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-404D22
Chromosome	9 (Build37)
Map Location	47,011,734 - 47,012,142
singlet/doublet	singlet
Overlap gene	none
Upstream gene	BC033915, Apoa1, Apoc3, Apoa4, Apoa5, Zfp259, Bud13, 4931429L15Rik, LOC100042722, EG667890, 2900052N01Rik, D930036J05
Downstream gene	Cadm1, LOC100043303, D930028F11Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	BC033915 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70661 MGI:2446296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11806 MGI:88049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp259 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bud13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931429L15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	LOC100042722 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667890 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667890 MGI:3644829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D930036J05 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cadm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC100043303 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	D930028F11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244853 MGI:1924792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC033915 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890216 GeneID:70661 MGI:2446296
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC033915 transcript_id : NM_027498.2

name	Apoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803330 GeneID:11806 MGI:88049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-I transcript_id : NM_009692.2

name	Apoc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344172 GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein C-III transcript_id : NM_023114.3

name	Apoa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347472 GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-IV transcript_id : NM_007468.2

name	Apoa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372938 GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-V transcript_id : NM_080434.3

name	Zfp259 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778942 GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 259 transcript_id : NM_011752.2

name	Bud13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130241 GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BUD13 homolog (yeast) transcript_id : NM_146000.2

name	4931429L15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259951 GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 4931429L15 gene transcript_id : XM_001479853.1

name	LOC100042722 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259922 GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042722 transcript_id : XM_001478689.1

name	D930036J05 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259953 GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein D930036J05 transcript_id : XM_001479857.1

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040101 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207675.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040103 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_018770.3

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040105 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207676.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040106 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_001025600.1

name	D930028F11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778977 GeneID:244853 MGI:1924792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930028F11 gene transcript_id : NM_172921.2

name	BC033915 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890217 CCDS:CCDS23140.1 GeneID:70661 MGI:2446296
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70661 protein_id : NP_081774.2

name	Apoa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753096 GeneID:11806 MGI:88049
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IMP]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IDA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : acts as a cofactor for the lecithin cholesterol acyltransferase product : apolipoprotein A-I protein_id : NP_033822.1

name	Apoc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15421856 CCDS:CCDS23141.1 GeneID:11814 MGI:88055
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein C-III protein_id : NP_075603.1

name	Apoa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347473 CCDS:CCDS23142.1 GeneID:11808 MGI:88051
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-IV protein_id : NP_031494.2

name	Apoa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560003 CCDS:CCDS23143.1 GeneID:66113 MGI:1913363
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0017129 - triglyceride binding [Evidence IDA] GO_process : GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-V protein_id : NP_536682.2

name	Zfp259 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756053 CCDS:CCDS23144.1 GeneID:22687 MGI:1330262
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IDA] codon_start : 1 product : zinc finger protein 259 protein_id : NP_035882.1

name	Bud13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122459 CCDS:CCDS23145.1 GeneID:215051 MGI:2443443
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] codon_start : 1 product : BUD13 homolog protein_id : NP_666112.1

name	4931429L15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259952 GeneID:74361 MGI:1921611
definition	codon_start : 1 product : hypothetical protein LOC74361 protein_id : XP_001479903.1

name	LOC100042722 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259923 GeneID:100042722
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478739.1

name	D930036J05 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259954 GeneID:215467
definition	codon_start : 1 product : similar to LRRGT00042 protein_id : XP_001479907.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040102 CCDS:CCDS23149.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform a protein_id : NP_997558.2

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040104 CCDS:CCDS23148.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant 3; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform c protein_id : NP_061240.3

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575940 CCDS:CCDS23150.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform b protein_id : NP_997559.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040107 CCDS:CCDS23147.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform d is encoded by transcript variant 4; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform d protein_id : NP_001020771.1

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 2 pseudo : _no_value

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 1 pseudo : _no_value

name	LOC100043303 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043303
definition	number : 1 pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259924 GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2900052N01 gene transcript_id : XR_035381.1

clone name	MSMg01-171L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422P16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-455B24
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-086A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-404D22.T7 (MSMg01no404_d22.b1)	MSMg01-404D22.TJ (MSMg01no404_d22.g1)
ACC	AG502963	AG502964
length	786	779
length of high quality (start - end)	443 (36 - 478)	489 (65 - 553)
definition	CHROMAT_FILE: MSMg01no404_d22.b1 PHD_FILE: MSMg01no404_d22.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:50 2005	CHROMAT_FILE: MSMg01no404_d22.g1 PHD_FILE: MSMg01no404_d22.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:50 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGAGT CATTCCCACTTTGAAAGTCTCTTCTTGCTCTCTTACTCTTGCTTCCCTCT TGCTTCTCTCTTGCTCCTCCTCTCCCCTTCTCCCAACCCTCTCTCCATGT GCTCTTGGCCATGGCTGGCCTTTACTTCTCTTCTCTTCTCTTCTCTTCTC TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCCTTCCC TTCCCTTCCCTTCTTTTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCCCCTTCTCTGACTCTACTACCCTCTTAACTCCCC TCCCCATGCCCTAAATAAACTCTATTCTATACTAAAAAGAAAAAAAAAGT CTACAAAATACATGTGACCTTCCTATGTTCCCTGCCTTTGGTAACTCTAA ATTGAATTGAAGAAGCTGAAATGAAAAAGTTATTGGTTCATTTCCTGCCT TCCAATTCCCCCGGCAAAAAGGCAAGAAAAAGAAACCAAAAAATTTTTTC TTTTTTAAAATAAGGGGAAAAAGGCCTTATTCCCCCCCCTAACCAAAAAA TGTAAAATCTACAAAATAAAACTTCCTTTTATAAAAGGAAAGGGAAATGA AAAAACAAATTTTCAAATGGAATTAAAAAGAAAAAAATTTAACGTTTTTT TTCAACAAAAGGGCGAGGACCTCAATTAAATTAAAT	GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXTCTTCTTTTCTGACATGGGCATTTAGTGGTATTAAT TTGCCTGTAGGTAATTCTGCAGCCCTGTATCTCAGTTTTATCTTAATTTA GCTCAGAATGTTTTGGCTTTCTTTTTTGTCTCTTCTTTGACTCACAGGCT ATTAAGAAGTATGCTTTCTAGCGTCTTGATATTTTATAATTTCCTAAATA TTTTTCTTTTTTTGATTTCAAATTTGCTTCCAGTTTATTCCAAGAACATA CATGGCATAACTTTAATTCTTTAAAATCTTCCAAAGATGTGGTTTGAAAG ATATATCCTATTTGATTTATGACTGACATTCATTCTGTGGCTACATAAAT TCATATAACCATGAATTTATGTGTATGCTATGTGCATTTGGGAAAATTTT TTTTCCTGTTGGATAGAATAACCTACTTACATCAGGCCAAATTTCTGGTT ACTCTTAATCAAGTCTTCTGTATCATTTCTGATTTTCTGTTATTTGGTTT AGCAAGTGTTAAGAGGAGGCTATTTGAACATTCAAGCATTCTTGTGGATA TGGCTATTTCCCATTTTCATTCTATCCATCTTTGCCCCCTGGATTTTTAA TTCTATTATTTGGTGCGTAAACATTTAGAATGGGTTTATCCTAATTGGAA AATTGACCCCCTCAACCTTTTTAAATATAAAGTTCTTTACCCAGGGGAAT GGTCCTCTCAATAAAAAAAGGTTTTTTTG
quality values	Open. Hide. 10 10 19 23 20 12 17 10 8 8 8 8 23 23 59 26 15 15 12 14 19 21 11 10 9 11 11 9 9 9 9 9 11 12 17 18 14 28 28 37 37 41 41 41 41 59 50 47 25 21 10 9 10 9 9 9 9 9 15 18 28 28 35 37 32 37 47 47 47 53 59 57 57 57 57 57 48 59 59 59 59 59 59 59 59 68 59 59 59 59 59 59 59 68 68 68 68 59 59 59 59 54 59 59 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 68 57 57 57 57 59 59 59 68 68 68 68 57 57 57 57 48 57 57 57 57 57 57 50 50 50 59 43 50 50 43 50 42 42 50 50 59 59 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 44 44 27 23 23 44 41 20 18 18 41 34 33 27 27 44 41 35 31 31 44 44 35 33 33 44 44 43 43 43 57 59 54 54 54 59 59 57 57 57 59 59 59 57 54 54 57 57 54 54 59 59 59 59 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 48 48 48 48 48 59 59 57 57 57 57 57 57 57 50 50 50 50 59 59 59 36 30 18 13 13 12 9 9 9 9 9 19 30 34 36 39 39 47 43 59 39 43 39 47 47 39 39 35 35 39 43 43 43 47 46 46 39 47 41 32 30 30 30 41 41 43 46 46 48 48 47 47 48 47 47 47 37 32 28 28 32 28 28 41 27 30 28 19 18 12 11 11 16 24 36 36 36 25 41 41 43 43 48 59 57 59 48 48 48 48 44 39 32 30 30 42 32 37 28 28 32 37 28 30 33 43 43 43 43 43 43 47 43 43 48 59 57 48 48 43 43 43 48 48 48 48 46 46 46 41 41 37 37 32 32 37 37 47 26 26 14 14 14 10 12 12 22 25 48 48 34 37 20 28 20 28 24 19 19 15 21 19 31 28 36 32 24 23 18 18 15 19 17 17 11 11 11 11 11 10 10 9 8 8 8 13 16 17 30 20 15 14 10 10 10 10 9 9 9 10 10 10 11 8 8 8 10 12 12 15 12 11 11 15 26 27 26 26 17 13 11 10 10 9 6 6 6 6 10 10 10 14 18 24 24 12 13 8 8 8 9 9 12 15 20 17 16 16 11 11 10 10 8 9 9 9 9 15 11 9 10 11 9 9 7 8 10 11 11 15 11 9 11 6 7 6 6 8 6 13 21 32 25 25 28 24 30 25 30 24 22 22 24 15 11 8 10 8 11 9 9 10 10 16 12 10 10 11 11 12 19 15 18 13 14 11 10 8 8 8 8 8 8 8 8 11 13 14 14 13 15 10 11 11 12 14 14 12 9 8 8 8 8 8 8 10 11 13 11 10 10 10 10 11 11 10 9 9 9 10 12 10 10 10 10 12 12 12 12 19 10 6 6 6 8 8 11 15 12 14 9 9 9 13 10 12 11 13 10 10 10 13 12 10 8 6 6 6 10 8 10 9 18 13 13 10 9 9 9 9 9 9 8 8 8 8 13 13 15 12 12 13 20 28 28 17 15 12 15 15 15 11 9 9 8 8 10 9 10 10 9 9 10 7 6 8 8 16 11 19 17 10 8 8 8 8 8 8 8 8 8 10 10 11 12 13 11 11 12 12 15 12 14 12 13 18 15	Open. Hide. 6 6 8 8 19 25 35 37 43 39 39 39 39 39 39 37 44 59 44 35 27 18 9 9 9 14 11 12 13 14 16 14 24 22 26 37 37 24 24 23 23 22 31 34 30 18 14 14 19 25 13 15 10 12 10 10 11 9 9 11 21 23 33 33 48 48 48 50 59 59 59 57 53 53 53 42 47 36 43 36 42 48 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 52 34 34 32 32 35 38 38 52 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 68 68 68 68 68 59 59 54 54 54 59 59 68 59 59 48 48 48 48 48 68 68 68 68 54 54 54 57 54 57 57 57 57 68 68 57 57 68 59 59 48 48 57 59 59 59 57 48 48 37 36 42 42 36 38 59 59 59 59 59 59 47 47 41 41 41 30 30 32 37 37 37 40 39 39 39 39 37 34 44 43 44 47 41 41 40 41 41 41 37 31 31 31 31 39 39 39 37 37 39 39 37 35 32 35 37 37 39 41 41 37 37 36 31 37 32 24 24 34 34 37 25 25 11 11 10 11 11 28 28 41 41 35 36 36 34 28 25 22 22 34 34 28 28 14 12 12 12 16 16 25 21 29 29 25 30 21 21 15 17 12 9 9 9 9 10 15 9 9 8 10 9 15 29 17 34 37 30 24 13 11 11 10 15 10 10 8 8 8 10 10 10 10 14 10 12 17 11 11 11 12 12 19 12 11 11 11 11 8 10 8 8 8 9 10 8 8 8 9 9 9 12 8 8 8 11 11 10 9 9 9 13 12 9 9 9 8 8 8 10 9 9 16 17 17 19 18 20 24 19 17 21 13 10 8 8 8 8 9 9 10 8 11 8 7 12 7 7 6 6 6 6 6 8 8 8 8 8 8 8 11 10 10 10 9 12 11 8 6 6 8 8 8 8 9 10 9 11 11 10 9 12 8 8 8 8 8 8 8 10 10 10 9 9 10 9 9 12 7 6 8 8 6 9 9 9 10 10 8 8 8 8 8 8 8 8 9 6 6 6 6 8 10 10 12 10 13 9 8 8 9 8 8 8 10 10 10 10 8 8 8 8 8 8 10 10 11 15 15 23 16 13 8 8 8 8 8 8 10 12 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no404_d22.g1 MSMg01no404_d22.g1 CHROMAT_FILE:
MSMg01no404_d22.g1 PHD_FILE: MSMg01no404_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:50 2005
         (489 letters)



>mm_chr9_47011253_47012142
          Length = 890

 Score =  775 bits (401), Expect = 0.0
 Identities = 407/409 (99%), Gaps = 1/409 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  atttagctcagaatgttttggctttcttttttgtctcttctttgactcacaggctattaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 atttagctcagaatgttttggctttcttttttgtctcttctttgactcacaggctattaa 831

                                                                       
Query: 142 gaagtatgctttctagcgtcttgatattttataatttcctaaatatttttctttttttga 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaagtatgctttctagcgtcttgatattttataatttcctaaatatttttctttttttga 771

                                                                       
Query: 202 tttcaaatttgcttccagtttattccaagaacatacatggcataactttaattctttaaa 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tttcaaatttgcttccagtttattccaagaacatacatggcataactttaattctttaaa 711

                                                                       
Query: 262 atcttccaaagatgtggtttgaaagatatatcctatttgatttatgactgacattcattc 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atcttccaaagatgtggtttgaaagatatatcctatttgatttatgactgacattcattc 651

                                                                       
Query: 322 tgtggctacataaattcatataaccatgaatttatgtgtatgctatgtgcatttgggaaa 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tgtggctacataaattcatataaccatgaatttatgtgtatgctatgtgcatttgggaaa 591

                                                                       
Query: 382 a-ttttttttcctgttggatagaataacctacttacatcaggccaaatttctggttactc 440
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atttttttttcctgttggatagaataacctacttacatcaggccaaatttctggttactc 531

                                                            
Query: 441 ttaatcaagtcttctgtatcatttctgattttctgttatttggtttagc 489
           |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 530 ttaatcaagtcttctgtatcatttctgattttctgttatttgttttagc 482


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 890
Length adjustment: 10
Effective length of query: 479
Effective length of database: 880
Effective search space:   421520
Effective search space used:   421520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information