Query= MSMg01no406_p11.b1 MSMg01no406_p11.b1 CHROMAT_FILE:
MSMg01no406_p11.b1 PHD_FILE: MSMg01no406_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:28 2005
(380 letters)
>mm_chr9_29794462_29795241
Length = 780
Score = 696 bits (360), Expect = 0.0
Identities = 375/380 (98%)
Strand = Plus / Minus
Query: 1 atattttaaaaaaggaacttgcatactgggaaagagaaggaagcaacccttaaattaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atattttaaaaaaggaacttgcatactgggaaagagaaggaagcaacccttaaattaatg 363
Query: 61 aaactgacgatcctagacacagggaacatctcaccctaatgagtagaagcttgctaggcc 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 362 aaactgacgatcctagacacaggaaacatctcaccctaatgagtagaagcttgctacgcc 303
Query: 121 tgttttccatgaaaagagctgagtgaggcagccagacaggagatgtagggtattcccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgttttccatgaaaagagctgagtgaggcagccagacaggagatgtagggtattcccata 243
Query: 181 tgggcacaggtcttatgggattggtgaggcaggatgtctgcttctgaaacctagaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgggcacaggtcttatgggattggtgaggcaggatgtctgcttctgaaacctagaccaag 183
Query: 241 tttgtatttggacttttaatcttactagtgtgagggtgaattactctctccgggattcca 300
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 182 tttgaatttggacttttaatcttactagtgtgagggtgaattactctctctgggtttcca 123
Query: 301 atttctcattttgaaaatggggataataataacatctttctcatggaacatttatgagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atttctcattttgaaaatggggataataataacatctttctcatggaacatttatgagga 63
Query: 361 ttgaaggaggtaagatatgc 380
||||||||||||||||||||
Sbjct: 62 ttgaaggaggtaagatatgc 43
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_p11.g1 MSMg01no406_p11.g1 CHROMAT_FILE:
MSMg01no406_p11.g1 PHD_FILE: MSMg01no406_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:28 2005
(431 letters)
>mm_chr9_29608519_29609348
Length = 830
Score = 779 bits (403), Expect = 0.0
Identities = 424/431 (98%), Gaps = 1/431 (0%)
Strand = Plus / Plus
Query: 1 ttcttcaagtaaggaggaaatatatggtgagttccaagccttgatggttgtaatataatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttcaagtaaggaggaaatatatggtgagttccaagccttgatggttgtaatataatc 260
Query: 61 tttttttgatatcggaggctcctttctttctggaaacacattgtcctcatttcacagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttttgatatcggaggctcctttctttctggaaacacattgtcctcatttcacagttc 320
Query: 121 ccttgtatatatgtgtttggcagtgaggatccattaagtcagtagaattgtatgaacatt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttgtatatatgtg-ttggcagtgaggatccattaagtcagtagaattgtatgaacatt 379
Query: 181 cattcaaccatgtgttgaagggactgctgagtgccagtcaccattctatgcaaaggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cattcaaccatgtgttgaagggactgctgagtgccagtcaccattctatgcaaaggagaa 439
Query: 241 tatttttgtccaagcatcccaggtcttgactttcggtacttggtagtgtcaagagaaagc 300
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 gatccatgtccaagcatcccaggtcttgactttgggtacttggtagtgtcaagagaaagc 499
Query: 301 tagctgcatagactgtgtcagggtgtatgagagctgtgctgaggcatattattagtacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tagctgcatagactgtgtcagggtgtatgagagctgtgctgaggcatattattagtacag 559
Query: 361 aggactggacatgttgacttctagttggattgcatttcttccccctctccctctggctgt 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggactggacacgttgacttctagttggattgcatttcttccccctctccctctggctgt 619
Query: 421 gtaaggaccag 431
|||||||||||
Sbjct: 620 gtaaggaccag 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 830
Length adjustment: 9
Effective length of query: 422
Effective length of database: 821
Effective search space: 346462
Effective search space used: 346462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
