Query= MSMg01no408_b20.b1 MSMg01no408_b20.b1 CHROMAT_FILE:
MSMg01no408_b20.b1 PHD_FILE: MSMg01no408_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:59 2005
(277 letters)
>mm_chr9_62583462_62584138
Length = 677
Score = 474 bits (245), Expect = e-138
Identities = 265/273 (97%), Gaps = 4/273 (1%)
Strand = Plus / Plus
Query: 5 gaattctttctattctcaagaagtgacccaatttccagaacaaattcatgggaaaaaaat 64
||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 205 gaattctttctattcccaagaagtgacccaatttccagaacaaatccatgggggaaaaat 264
Query: 65 ggcaggtgtggtggtgtttgtttctaatccaagtgctgagaggtaggggccaatcagtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcaggtgtggtggtgtttgtttctaatccaagtgctgagaggtaggggccaatcagtct 324
Query: 125 gacctaattggcaagcaccagatcaatggcagaccctgtctcaaaagaggatggtgttcc 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 gacctaattggcaagcaccagatcaatggcagaccctgtctcaaa-gaggatggtgttcc 383
Query: 185 tgaggataacacctgagagtttcctccagcctctccagtatcacgcattcacacacacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaggataacacctgagagtttcctccagcctctccagtatcacgcattcacacacacac 443
Query: 245 acacacacacacacacacacacactccacacac 277
|||||||||||||||||||||||| ||||||
Sbjct: 444 acacacacacacacacacacacac---acacac 473
Score = 62.6 bits (32), Expect = 3e-14
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 234 cacacacacacacacacacacacacacacac-acac 268
||||||||||||||||||||||||||||||| ||||
Sbjct: 641 cacacacacacacacacacacacacacacaccacac 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 2
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no408_b20.g1 MSMg01no408_b20.g1 CHROMAT_FILE:
MSMg01no408_b20.g1 PHD_FILE: MSMg01no408_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:59 2005
(399 letters)
>mm_chr9_62733764_62734562
Length = 799
Score = 690 bits (357), Expect = 0.0
Identities = 363/367 (98%), Gaps = 4/367 (1%)
Strand = Plus / Minus
Query: 37 caggtcatcagctttggtgacaagaaccttcacccactgagacatcttgtcagcactttt 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caggtcatcagctttggtgacaagaaccttcacccactgagacatcttgtcagcactttt 740
Query: 97 ttattgtcttataagtagtgacaaattgagacatttaaaattcttttgaatcttacc--- 153
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttattgtcttataagtagtgacaaattgagacatttaaaattcttttgaatcttaccttt 680
Query: 154 -ttttttttttttttttttttttgagatagtctttctatgtagtcctgcttggcctcaaa 212
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tttttttttttttttttttttttgagatagtctttctatgtagtcctgcttggcctcaaa 620
Query: 213 ctcatagatatataccagccagcatatactgtcttgcacagactcatctttttttctttt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctcatagatatataccagccagcatatactgtcttgcacagactcatctttttttctttt 560
Query: 273 tttaaagtttgatatgtcagtacattcatttgtatcttaaaaagaatttcagctatagat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttaaagtttgatatgtcagtacattcatttgtatcttaaaaagaatttcagctatagat 500
Query: 333 ttatctttataacttagtggcttatggactaatcatttaacttcccagatgcagggtact 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttatctttataacttagtggcttatggactaatcatttaacttcccagatgcagggtact 440
Query: 393 ctgagca 399
|||||||
Sbjct: 439 ctgagca 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
