GGAGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTCCTGGTAACTAAAGGTTATTTTTATCCTCTATGTATGTG
GGATGGGTGGGAGGGGGTGTTCCCCCCCTCTCCTTTTCCCTTCTTTCTTC
CTTCTTCCTCTTTCTCTCTCTTGAGCGTGATCATCCTCCCCTCGTCCGTC
GCTGACTCACTTTACGAATACCCTTGATACTCTCGTATTAATACCTATTT
CTGTACAACTCTCGTCCTCTTCCTTTCCTTTTTCCCGTCTCCCTTTTCCC
TCTCCCCCCTCCTTTTTTTTTCCCCATACCCTCTTTCCTATTCTCAACAT
ATACCTCCTTTCTTCCCCTCTTACTCCCTCCCTTCTACCTACCATTTTCT
ATCGTTCTTACCCTCCACTCCTATAACGTCCCCCCTCCTCTTATCTTACC
CTTCTCTCTTCGCTCTCCCTTATCACCTCCTCCCCCTCTCCCTCCTTTTC
CTTTCTCCCTCGATCTCTTCTCCTTTTCTCCCTCCTACCCCCCCTTCCGC
CTCTATAGCTTTCCCCTCTTCCCCCGTTGTCCCCTTCCCTTTTCCTCCAT
CCTCACTTCATCATCGTTCCTCCCCCTCTCCCTTTCTCCCTATCTTTCTT
CCTTTCCATCGTCTACTTCTCCTCCTTCCTTCTTCTTTCCCTTCTTTTTT
CCTACTAAATCTTCTTTACCATTTCTTACGTATTTTTCCCACCCCGTACT
GATTTTATCACTCCCCTTACCCCC

AAAAAACGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTGACTGCAGACCAGG
CCGTCACCACTGCTGTGTCTCAGGGTTGCTGTGTCTCAGCATTAAATAAC
TCTGCCAGTCCCGTTGCACCTGTGCTAGAGTTCCAGAACTGCTCCATTTC
TTGTCTCTGGTCTTCTTTTAATATTTTCTTGGGGGCAGACAGGCTAGGAA
CACTGACAAGTGCAAATACGTGTTTAAAAGCCCTGCGATTCAGCTGCATG
GTAGAGGTATGTCCTGTGGGTGGATCTGTCTGACCATCAGAGGTGAGGTC
TTACCCCCCAGACCTGACTTCCAGGCAGAAGTGGAGTCATAGAAGCTCTG
GGTTTTAATTCACTCCCTGCCTGAAGCAGAACCAGGTGAAAGTATATGTC
TCTGAACAAGAATAGTTTTTATTAAATTCAGTAGCTTATAAAATACTGTT
CACAGAAATAGGTTAGAAGCACTATTTGGACCATTTAAAGAAGGCAGCTA
GTGGCAAATGCTGGAGGCCAGCGATTCGGTTTGCAGGTATTGAAACCCAT
AAGTCAGAATGTACAACTCCCACACCGTCTGTTCCACATCCCCCCTCTCT
AGGGAAATAATGGCCTTTATGGCCAACTTTTTACTACAATTTTTTTCCAA
CACACGTAAACCTTGGGTACTTTTCCTTTGCGCATTTGAATTTGACGGTA
AATCCG

Query= MSMg01no410_p06.g1 MSMg01no410_p06.g1 CHROMAT_FILE:
MSMg01no410_p06.g1 PHD_FILE: MSMg01no410_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:51 2005
         (486 letters)



>mm_chr9_66365093_66365978
          Length = 886

 Score =  917 bits (474), Expect = 0.0
 Identities = 483/486 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttctgactgcagaccaggccgtcaccactgctgtgtctcagggttgctgtgtctcagca 60
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 686 cttccgactgcagaccaggccgtcaccactgctgtgtctcagggttgctgtgcctcagca 627

                                                                       
Query: 61  ttaaataactctgccagtcccgttgcacctgtgctagagttccagaactgctccatttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttaaataactctgccagtcccgttgcacctgtgctagagttccagaactgctccatttct 567

                                                                       
Query: 121 tgtctctggtcttcttttaatattttcttgggggcagacaggctaggaacactgacaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgtctctggtcttcttttaatattttcttgggggcagacaggctaggaacactgacaagt 507

                                                                       
Query: 181 gcaaatacgtgtttaaaagccctgcgattcagctgcatggtagaggtatgtcctgtgggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gcaaatacgtgtttaaaagccctgcgattcagctgcatggtagaggtatgtcctgtgggt 447

                                                                       
Query: 241 ggatctgtctgaccatcagaggtgaggtcttaccccccagacctgacttccaggcagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggatctgtctgaccatcagaggtgaggtcttaccccccagacctgacttccaggcagaag 387

                                                                       
Query: 301 tggagtcatagaagctctgggttttaattcactccctgcctgaagcagaaccaggtgaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggagtcatagaagctctgggttttaattcactccctgcctgaagcagaaccaggtgaaa 327

                                                                       
Query: 361 gtatatgtctctgaacaagaatagtttttattaaattcagtagcttataaaatactgttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 326 gtatatgtctctgaacaagaatagtttttattaaattcagtagcttaaaaaatactgttc 267

                                                                       
Query: 421 acagaaataggttagaagcactatttggaccatttaaagaaggcagctagtggcaaatgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acagaaataggttagaagcactatttggaccatttaaagaaggcagctagtggcaaatgc 207

                 
Query: 481 tggagg 486
           ||||||
Sbjct: 206 tggagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)