Query= MSMg01no413_i14.b1 MSMg01no413_i14.b1 CHROMAT_FILE:
MSMg01no413_i14.b1 PHD_FILE: MSMg01no413_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:15 2005
(481 letters)
>mm_chr9_48608876_48609757
Length = 882
Score = 886 bits (458), Expect = 0.0
Identities = 476/482 (98%), Gaps = 1/482 (0%)
Strand = Plus / Plus
Query: 1 aggctttcgagcaa-catgcagaatcctgcctcagaaaccagaaatgagccttagcagtc 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctttcgagcaaacatgcagaatcctgcctcagaaaccagaaatgagccttagcagtc 260
Query: 60 cctgagtgttgaaggaataagaccccacccctttcttctggtcaagaccccatttctcca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgagtgttgaaggaataagaccccacccctttcttctggtcaagaccccatttctcca 320
Query: 120 gcatgatcgctcatcagttggctaggctatgaaaacgggggccccttccccacctttatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgatcgctcatcagttggctaggctatgaaaacgggggccccttccccacctttatt 380
Query: 180 tcaatacaggtgcttaattaagttctgaagaggaaaggccctctgccctcttccagggct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaatacaggtgcttaattaagttctgaagaggaaaggccctctgccctcttccagggct 440
Query: 240 ccactgcccacacttttcttgaataagaggcagagaggttaggactccagtgctggcttc 299
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccactgcccacacaactcaagaataagaggcagagaggttaggactccagtgctggcttc 500
Query: 300 tcttcagactcaagagactgtcaaagagttagctgcttctttttcttcttcttttaattt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttcagactcaagagactgtcaaagagttagctgcttctttttcttcttcttttaattt 560
Query: 360 aagtcagactttttatatatcccaagctgtgaaacactaagaaagatccaacactaatta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtcagactttttatatatcccaagctgtgaaacactaagaaagatccaacactaatta 620
Query: 420 aaagcaatcaatgtatagttacattaagtgggaaagcagctatgtgtctggcgttaaagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagcaatcaatgtatagttacattaagtgggaaagcagctatgtgtctggcgttaaagg 680
Query: 480 tt 481
||
Sbjct: 681 tt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_i14.g1 MSMg01no413_i14.g1 CHROMAT_FILE:
MSMg01no413_i14.g1 PHD_FILE: MSMg01no413_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:15 2005
(241 letters)
>mm_chr9_48744134_48744774
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Minus
Query: 1 atataagcacgcacgtgcgtgcacacacacagaggacgcatcgcactatacacacagaga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 atataagcacgcacgtgcgtgcacacacacagaggacgcgtcgcactatacacacagaga 382
Query: 61 ctgcacataaagatgggggaggaagatgaatagtcgggttctggttcctttatgtaaaga 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcacacaaagatgggggaggaagatgaatagtcgggttctggttcctttatgtaaaga 322
Query: 121 gctttgagaatcatcctagctctagatagatgcagcctccacacacccctcaacacagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctttgagaatcatcctagctctagatagatgcagcctccacacacccctcaacacagtg 262
Query: 181 cagctctgccacattccctgagctttccctcaacctgcctgtgcctcttctgaccaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctctgccacattccctgagctttccctcaacctgcctgtgcctcttctgaccaggca 202
Query: 241 g 241
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
