ACTCCTATAGTCAGAGGATCCGCGGAATTCAGCGCCATCATCTTCAGCAG
CACTAAGGTACATTGAGGACTCTGAAGAGCTTGGGGAGGATTAAAGACGG
TACAAAGTAACAAGTAGAGCTCTGAGATCTTGTTGGAGTTAGATGAAAGA
TCTCCCCAGCAGACATGAGGAATGACAGTTGGACATCCAGAGCGTTTTCC
AAGTTTCTGTTTTAAGACATAATCTTTTCATTTCTCAGCTTGACCTGCTG
TATACATTAACCCACAGTTTGCTCTCAGAGCCCATTTGAGCACTTGCTTC
TGTGTTGAGACCTGATGGCCAACTGACGTGCCCCCACCGATGGACCTGAA
TGCTCATATTAGGAACCGTGCACAACTAAGCCTCAAATATACAAGGTGTC
CCTGAAATAACACCTGATGCTTATACAGTGCTATTTTGTTTTTGTGCAGC
TGTAACAGAATACCTGAGTCTGGGTGGTTTATAATAGAAATGTTTTTCTC
ATTCTTTTACGGTCTAGGAGATCTAAGATCAAGAGACCAGAATCTAAAAT
CCAGGCCTGGCACTATGTACCTGTAATCCCAGCATTGCTGGGGATGGAAG
GAGACAGGAATTTCCCAAGCTCCTTGTTTAGCCCCCCTAAGAACAAACGA
AGTTCCAGGGCAGTGAGAGAACCTGTCTCCAAAAATAACGGTTTTGATAA
AAGGCCCCTCCTTTTCCTGGTGG

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCTAGGTGGTTAAGGTTATGAATT
TGTCCTAAATTCTATTCCATTGATGTTCATGCCTGTCTCTGTGGTTTTTA
TCACTGTTGCTCTGTAGTGGAGCTCAAGGTCAGGGATGGTGATTTCCCCA
TAAGTTCTCTTATTGTTGAGACGAGAGTGGCCCAGGCTCTAAGATCCACT
GTAGACAAATGGGATCTCATAAAACTGAAAAACTTGTGTAAGGCAAAGGA
CACAGTCATCAGGACAAAATGGCAACTTACAGATTGGGAAAAGATCTTTA
TCAATCCTACATCTGATAGAAGACTAATATCCAATATATACATAGAACTA
AAGTAGCTAGACCCCAGAGAACCAAATAACCCTATTTAAAAATGGGGTAT
AGTGATAAACAAAGAATTCTCAACTGAGGAATATGGAATGGCCAAAAAGC
ACCTAAAGAAATGTTCAACATCCTTAGTCATCAGGGAAATGCAAATAANA
ACAACCCTGAGATTCCCCCCTCACACCAGTCAGAAATGGTTAAGATAAAA
ACCTCCAGGCACAGCATATGCTGACCGAGGAATGGAGAAAAAGGAATACT
TCCCCCTTGGTGGGGGGATTAAAAACTGGGTAAAAACCTCTTGAAAACAG
CTCTGGAGGTCCTCTAAAAATTGGGTATAATTTTTCTTAGGGAACCG

Query= MSMg01no416_c20.b1 MSMg01no416_c20.b1 CHROMAT_FILE:
MSMg01no416_c20.b1 PHD_FILE: MSMg01no416_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:45 2005
         (587 letters)



>mm_chr9_117666638_117667629
          Length = 992

 Score = 1044 bits (540), Expect = 0.0
 Identities = 570/582 (97%), Gaps = 5/582 (0%)
 Strand = Plus / Plus

                                                                       
Query: 11  gaattcagcgccatcatcttcagcagcactaaggtacattgaggactctgaagagcttgg 70
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 211 gaattcagcgccatcatcttcagcagcacaaaggtacattgaggactctgaagagcttgg 270

                                                                       
Query: 71  ggaggattaaagacggtacaaagtaacaagtagagctctgagatcttgttggagttagat 130
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggaggattaaaggcggtacaaagtaacaagtagagctctgagatcttgttggagttagat 330

                                                                       
Query: 131 gaaagatct----c-cccagcagacatgaggaatgacagttggacatccagagcgttttc 185
           |||||||||    | ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaaagatctaccccacccagcatacatgaggaatgacagttggacatccagagcgttttc 390

                                                                       
Query: 186 caagtttctgttttaagacataatcttttcatttctcagcttgacctgctgtatacatta 245
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 391 caagtttctgttttaagacataatcttttcatttctcagcttgacctgctatatacatta 450

                                                                       
Query: 246 acccacagtttgctctcagagcccatttgagcacttgcttctgtgttgagacctgatggc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acccacagtttgctctcagagcccatttgagcacttgcttctgtgttgagacctgatggc 510

                                                                       
Query: 306 caactgacgtgcccccaccgatggacctgaatgctcatattaggaaccgtgcacaactaa 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 caactgacgtgcccccaccgatggacctgaatgctcatattaggaaccgtgcacaactaa 570

                                                                       
Query: 366 gcctcaaatatacaaggtgtccctgaaataacacctgatgcttatacagtgctattttgt 425
           ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 571 gcctcaaatatgcaaggtgtccctgaaataacacctgatgcttatacagtgttattttgt 630

                                                                       
Query: 426 ttttgtgcagctgtaacagaatacctgagtctgggtggtttataatagaaatgtttttct 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttttgtgcagctgtaacagaatacctgagtctgggtggtttataatagaaatgtttttct 690

                                                                       
Query: 486 cattcttttacggtctaggagatctaagatcaagagaccagaatctaaaatccaggcctg 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cattcttttacggtctaggagatctaagatcaagagaccagaatctaaaatccaggcctg 750

                                                     
Query: 546 gcactatgtacctgtaatcccagcattgctggggatggaagg 587
           ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 751 gcactatgtacctgtaatcccagtattgctggggatggaagg 792


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 992
Length adjustment: 10
Effective length of query: 577
Effective length of database: 982
Effective search space:   566614
Effective search space used:   566614
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)