Query= MSMg01no416_h09.b1 MSMg01no416_h09.b1 CHROMAT_FILE:
MSMg01no416_h09.b1 PHD_FILE: MSMg01no416_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:05 2005
(524 letters)
>mm_chr9_44517234_44518156
Length = 923
Score = 803 bits (415), Expect = 0.0
Identities = 444/457 (97%), Gaps = 7/457 (1%)
Strand = Plus / Minus
Query: 6 gaattcagatgtttctctccctacctctacccctggaggccacctagaacacaggataat 65
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 456 gaattcagatgttcctttccctacctcta-ccctggaggccacctagaacacaggataat 398
Query: 66 ttcaaggcagtagcatctagacttcaggactggcttgaccaaggccttccctccaggatg 125
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttcaaggcagaagcatctagacttcaggactggcttgaccaaggccttccctccaggatg 338
Query: 126 ggtgggtgaactgggctggtgcagcacaggggtaaggcattccacaagcagcttggctag 185
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 337 ggtgggtgaactgggctggtgcagcacaggggaaaggcattccacaagcagcttggctag 278
Query: 186 cctcacttagctgagattgctcctaggactttgccttccctccggtccaggtgtttgagg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cctcacttagctgagattgctcctaggactttgccttccctccggtccaggtgtttgagg 218
Query: 246 cgtgatagtgaactggcggtggtggtggtggtg------ctgatgctgttggtggtgttg 299
|||||||||||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 217 cgtgatagtgaagtggtggtggtggtggtggtggtggtgctgatgctgttggtggtgttg 158
Query: 300 ggaaggttctcttgactttcccgcccagcttccagcccatggccccactctggctttgga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ggaaggttctcttgactttcccgcccagcttccagcccatggccccactctggctttgga 98
Query: 360 atcagtaatcacagtgtctcctctgcatgtccttcagaggggtgactcaccaactcctcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atcagtaatcacagtgtctcctctgcatgtccttcagaggggtgactcaccaactcctcc 38
Query: 420 ctcgtccccctttccgccctcagaggtgtcatctcac 456
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 ctcgtccccctttccgccctcagaggtgtcatctcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_h09.g1 MSMg01no416_h09.g1 CHROMAT_FILE:
MSMg01no416_h09.g1 PHD_FILE: MSMg01no416_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:05 2005
(293 letters)
>mm_chr9_44353256_44353948
Length = 693
Score = 557 bits (288), Expect = e-163
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 ataaactttgtgagcatttcacaaacaagaacattacattgaaaaatatttgtgagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaactttgtgagcatttcacaaacaagaacattacattgaaaaatatttgtgagttaa 260
Query: 61 ttagaatacagtaatttgggttttcttaattataagcttttctagagcaccctactagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagaatacagtaatttgggttttcttaattataagcttttctagagcaccctactagtt 320
Query: 121 ctaaactatgacatgaaaccaactagcttacagagtcccattcactctggattagctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaactatgacatgaaaccaactagcttacagagtcccattcactctggattagctgtt 380
Query: 181 gagggttttgcttccctagagccatgactggtctcatcttggctattgaatcaatctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagggttttgcttccctagagccatgactggtctcatcttggctattgaatcaatctgct 440
Query: 241 ttcagatggattatcangacaggcagtgcaggttcagtgtgttcaacggta 291
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagatggattatcaggacaggcagtgcaggttcagtgtgttcaacggta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
