Query= MSMg01no417_m07.b1 MSMg01no417_m07.b1 CHROMAT_FILE:
MSMg01no417_m07.b1 PHD_FILE: MSMg01no417_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:45 2005
(353 letters)
>mm_chr9_91668086_91668838
Length = 753
Score = 659 bits (341), Expect = 0.0
Identities = 350/353 (99%)
Strand = Plus / Plus
Query: 1 catgttgggtgtgtagaaacctacccaactactgaggtcatgtacattgaaggagaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgttgggtgtgtagaaacctacccaactactgaggtcatgtacattgaaggagaacct 260
Query: 61 agtactgtcactttactaaaggaacataattcctaactgccttctcaattctgattctta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 agtactgtcactttactaaaggaacataattcctaactgtcttctcaattctgattctta 320
Query: 121 tacccacagataattttagcagcctgactccagaggggaaaagaaatcttgtgcatccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacccacagataattttagcagcctgactccagaggggaaaagaaatcttgtgcatccac 380
Query: 181 actggtgcctctgcttcaccacaagtgcctaggaactctattctctccaggaccctctgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actggtgcctctgcttcaccacaagtgcctaggaactctattctctccaggaccctctgc 440
Query: 241 cagcctcacattcatttatacaaaggagaatttaatatttatgatctggaagttgtgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcctcacattcatttatacaaaggagaatttaatatttatgatctggaagttgtgatc 500
Query: 301 ctcccttctctaaatcctaattgctgagattatggacctgccttttgtggtac 353
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ctcccttctctaaatcctaattgctgagattatggacctgtcttttgtggtac 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_m07.g1 MSMg01no417_m07.g1 CHROMAT_FILE:
MSMg01no417_m07.g1 PHD_FILE: MSMg01no417_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:45 2005
(241 letters)
>mm_chr9_91887470_91888111
Length = 642
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%), Gaps = 3/243 (1%)
Strand = Plus / Minus
Query: 1 tctttgctctggctctcgaactgcgtgaagaagtttgcttttctcccatctttttctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctttgctctggctctcgaactgcgtgaagaagtttgcttttctcccatctttttctcat 383
Query: 61 ttgcttgcttctcatctgctttggtgtctgactgtcttttaacaccttcattatgcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttgcttgcttctcatctgctttggtgtctgactgtcttttaacaccttcattatgcctct 323
Query: 121 caacatcagagtggattttttt-cttttcttctagttatcatttctctttattcacattt 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 322 caacatcagagtggattttttttcttttcttctagttatcatttctctttattcacattt 263
Query: 180 tattcctgagggttttttttgggggg-gtatctttccagttcctttttttaattctactg 238
||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||
Sbjct: 262 tattcctgagggttttttt-ggggggcgtatctttccagttccttttttttattctactg 204
Query: 239 gag 241
|||
Sbjct: 203 gag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
