Query= MSMg01no418_d13.b1 MSMg01no418_d13.b1 CHROMAT_FILE:
MSMg01no418_d13.b1 PHD_FILE: MSMg01no418_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:22 2005
(558 letters)
>mm_chr9_58444246_58445203
Length = 958
Score = 1056 bits (546), Expect = 0.0
Identities = 555/558 (99%)
Strand = Plus / Plus
Query: 1 atattgattatgagctatgaggtactaatatgagctttgggctggtcaattttagagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattgattatgagctatgaggtactaatatgagctttgggctggtcaattttagagttt 260
Query: 61 tcctgtaacgttattctatactgtgcctgtgaactgtctgccatgtagcacatagtttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgtaacgttattctatactgtgcctgtgaactgtctgccatgtagcacatagtttgt 320
Query: 121 tatggcaggtagatagaaaaattcaattatgggatgagggtgatattagggagcaatcca 180
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tgtggcaggtagatagaaaaattcaattatgggatgggggtgatattagggagcaatcca 380
Query: 181 gttttacagctgtaagaagaaaagagcgaattcttaaatttgcattagagtggtgcttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttacagctgtaagaagaaaagagcgaattcttaaatttgcattagagtggtgcttgt 440
Query: 241 gcaaattatcagagctaagagttctttagcatttgtatttcagtagcaaatacgtgtatt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaataatcagagctaagagttctttagcatttgtatttcagtagcaaatacgtgtatt 500
Query: 301 ttagcatttttcaaagcctagtggaagagtgtatggaatgtgttttagtggtagtgaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagcatttttcaaagcctagtggaagagtgtatggaatgtgttttagtggtagtgaggt 560
Query: 361 gtcacttacccttctgtaacataatatctgtttgtcattgaaagagctcaagaattgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcacttacccttctgtaacataatatctgtttgtcattgaaagagctcaagaattgtat 620
Query: 421 caagtcttaaactcttgaaataataccactggaaaacttgacaggcttggcagtaatagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagtcttaaactcttgaaataataccactggaaaacttgacaggcttggcagtaatagg 680
Query: 481 tgagcttaggtaaccagatacacaggcttgccaactcaagcctgtgcaactcaagggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagcttaggtaaccagatacacaggcttgccaactcaagcctgtgcaactcaagggttt 740
Query: 541 caccaggctacatcttta 558
||||||||||||||||||
Sbjct: 741 caccaggctacatcttta 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_d13.g1 MSMg01no418_d13.g1 CHROMAT_FILE:
MSMg01no418_d13.g1 PHD_FILE: MSMg01no418_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:22 2005
(513 letters)
>mm_chr9_58611631_58612543
Length = 913
Score = 603 bits (312), Expect = e-177
Identities = 335/346 (96%), Gaps = 7/346 (2%)
Strand = Plus / Minus
Query: 172 tttctggttttatataatgcactcgctctggcatgcttatcgtgctgaggctttggccac 231
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 913 tttctggttttatataatgcgctcgctctggcatgcttatcgtgctgaggctttggccac 854
Query: 232 ctcctccggcctctgttttt----tacctccactgtattctccaccaactgtcaaaagtt 287
||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 853 ctcctccggcctctg---ttaagatacctccactgtattctccaccaactgtcaaaagtt 797
Query: 288 ccaagcttcaagaagccaatctacattagaatcaggtctggctcaccctgccaggatgtt 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ccaagcttcaagaagccaatctacattagaatcaggtctggctcaccctgccaggatgtt 737
Query: 348 aaatccaaaaccctaggagtgtgtgatactcaagagctgaccttgacaatcagcttagac 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aaatccaaaaccctaggagtgtgtgatactcaagagctgaccttgacaatcagcttagac 677
Query: 408 cagagagcaactgagagaaaatgaggcagtgcctatgggctgtgcatatgaagagggacg 467
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 676 cagagagcaactgagagaaaatgaggcagtgcctgtgggctgtgcatatgaagagggacc 617
Query: 468 agagaaaagcaaggtggtttccttgtcttgcttctagctgctgagt 513
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 616 agagaaaagcagggtggtttccttgtcttgcttctagctgctgagt 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
