Query= MSMg01no419_b13.b1 MSMg01no419_b13.b1 CHROMAT_FILE:
MSMg01no419_b13.b1 PHD_FILE: MSMg01no419_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:29 2005
(336 letters)
>mm_chr9_33213806_33214542
Length = 737
Score = 611 bits (316), Expect = e-179
Identities = 331/337 (98%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 1 agttagaaggaataaagaataagaacgaagttgacaaagcgtaactccatgactacntt- 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 201 agttagaaggaataaagaataagaatgaagttgacaaagcgtaactccatgactacattc 260
Query: 60 tatttatttttgngnttattgtcagtttttcagatgttcatatttgtgcattttagaatt 119
|| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacttatttttgtgtttattgtcagtttttcagatgttcatatttgtgcattttagaatt 320
Query: 120 aagaaaaaaatactcacattaatatattaaggttaataacacatttagatatgtataaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaaaaaatactcacattaatatattaaggttaataacacatttagatatgtataaaa 380
Query: 180 tttaatttagttaatcaaagaatggactttgagattattcttcagtcttaatttctattg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaatttagttaatcaaagaatggactttgagattattcttcagtcttaatttctattg 440
Query: 240 acctactctacacaatgcttcaagacactcattagcagtccctttagatttccaaacaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctactctacacaatgcttcaagacactcattagcagtccctttagatttccaaacaac 500
Query: 300 caacaaaagtaactgttggaatgaactgttatttcca 336
|||||||||||||||||||||||||||||||||||||
Sbjct: 501 caacaaaagtaactgttggaatgaactgttatttcca 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 737
Length adjustment: 9
Effective length of query: 327
Effective length of database: 728
Effective search space: 238056
Effective search space used: 238056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_b13.g1 MSMg01no419_b13.g1 CHROMAT_FILE:
MSMg01no419_b13.g1 PHD_FILE: MSMg01no419_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:29 2005
(501 letters)
>mm_chr9_33345335_33346237
Length = 903
Score = 727 bits (376), Expect = 0.0
Identities = 389/394 (98%), Gaps = 2/394 (0%)
Strand = Plus / Minus
Query: 1 aggattattgtgcatgtagccaactttttaatctcttgtttgataaataagaagtataat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 394 aggattattgtgcatgtagccaactttttaatttcttgtttgataaataagaagtataat 335
Query: 61 tactcactcctgagaaaagtaataactgggtcttatggaaagatttgggttattttc--a 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 334 tactcactcctgagaaaagtaataactgggtcttatggaaagatttgggttattttcaaa 275
Query: 119 aaaaaaaaaaaaaaacacttcaaaactgtctatcaaaaacgagagagaagtttataccag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaaaaaaaaaaaaacacttcaaaactgtctatcaaaaacgagagagaagtttataccag 215
Query: 179 acgttaactacaactcctgtggctccctttcttgctagcacttcacagcagtgttgtgga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 acgttaactacaactcctgtggctccctttcttgctagcacttcacagcagtgttgtgga 155
Query: 239 ttttgcagattttaatacatatgtaatggtacttcttctttcctgttttaatttacaatc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ttttgcagattttaatacatatgtaatggtacttcttctttcctgttttaatttacaatc 95
Query: 299 ccctaatggtttaatatgagccttttcacacgtgctcagttttaatctggaatctttcgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 94 ccctaatggtttaatatgagccttttcacacgtgctcagttttaatctggaatcttttgg 35
Query: 359 atctatctgattatatcgtaaccattttctagcc 392
||||||||||| ||||||||||||||||||||||
Sbjct: 34 atctatctgatcatatcgtaaccattttctagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 903
Length adjustment: 10
Effective length of query: 491
Effective length of database: 893
Effective search space: 438463
Effective search space used: 438463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
