Query= MSMg01no420_c22.b1 MSMg01no420_c22.b1 CHROMAT_FILE:
MSMg01no420_c22.b1 PHD_FILE: MSMg01no420_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:56 2005
(280 letters)
>mm_chr9_77610241_77610920
Length = 680
Score = 542 bits (280), Expect = e-158
Identities = 280/280 (100%)
Strand = Plus / Plus
Query: 1 cacgtgcttttaatactttttaactatttgagtatattctaaatgccagcaggttttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgtgcttttaatactttttaactatttgagtatattctaaatgccagcaggttttgaa 260
Query: 61 aattctgaattgcacacaacaaatattagaatctgttttctttccttgtctggatggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattctgaattgcacacaacaaatattagaatctgttttctttccttgtctggatggggt 320
Query: 121 tttaacattgtctctgccgcagcatgcactaaaggctgccatcagattgtgtagtcgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaacattgtctctgccgcagcatgcactaaaggctgccatcagattgtgtagtcgtgc 380
Query: 181 gtagtaaacttagggatttttgtctgtgccaaggaagtacacacccttgcagctattcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagtaaacttagggatttttgtctgtgccaaggaagtacacacccttgcagctattcta 440
Query: 241 agaaattaacaggcagattaagtggtataaacttgctctt 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaattaacaggcagattaagtggtataaacttgctctt 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_c22.g1 MSMg01no420_c22.g1 CHROMAT_FILE:
MSMg01no420_c22.g1 PHD_FILE: MSMg01no420_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:56 2005
(500 letters)
>mm_chr9_77757534_77758434
Length = 901
Score = 586 bits (303), Expect = e-171
Identities = 306/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 1 tttaaagtacactgtttccaagccagaacgctcaagggggtgggaaagttcaagactctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tttaaagtacactgtttccaagccagaacgctcaagggggtgggaaagttcaagactctt 248
Query: 61 gatg-acgaggtcacttatgggttgatgatgcagtttgtaaactgccttagggtcaattg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gatgaacgaggtcacttatgggttgatgatgcagtttgtaaactgccttagggtcaattg 188
Query: 120 cggtgatgaaacgccatgaccagtaacttggggagggaagggtttattccactcatagtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cggtgatgaaacgccatgaccagtaacttggggagggaagggtttattccactcatagtt 128
Query: 180 ccatacaacaattcaccgttagaagcaaaggcaggagcctggaaggcagagctgatgcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccatacaacaattcaccgttagaagcaaaggcaggagcctggaaggcagagctgatgcag 68
Query: 240 aggccatgggggattgctgcttattggcttgcttcatagtgcttgctcagcctgctttct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aggccatgggggattgctgcttattggcttgcttcatagtgcttgctcagcctgctttct 8
Query: 300 tacagcc 306
|||||||
Sbjct: 7 tacagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 901
Length adjustment: 10
Effective length of query: 490
Effective length of database: 891
Effective search space: 436590
Effective search space used: 436590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
