XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCCCACTATTATTGTGTGGGATTTGATGTGTGATTTAAGCTTTAGTGCC
GTTTCTTTTATGAATGTGGGTACCCTTGCATTTGGGTCATAAATGTTCAG
AATTGAGATGTCCTCCTGGTAGACTTTTCCTTTGATGAGAATGAAGTGTC
CTTCTCTGTCTCTTTTGATTACTTTCGGTTAGAAGTCTATTTGATTAGAT
ATTAGAATGATTACTCCAGCTTGTTACTTGGGTTCATTTGTTTGAAAAAC
CTTTCTCCAGCCTTTATACTGAGATAATGACTATATTTTTTGTGTTTCTT
CTATACAGCACAAAGATGGATTCTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTNNNNNTTTTTTTTTNNTTTTTTTTNTTTTTTNTNTT
TTTTTTTTTTTTTTTTNTNTNTTTTTTTTTTTTTTNNTNTTTTTTTTTNN
TTTTTTTNTNTTTTTGTTTTNNNTTTTTTTTTTNNTTTTTTTTTTTTTTT
TNTTTTTNTTTTTTTTTTTTTTTTTTTTNTTTNTTNTNTTTTTNTTTTTT
TNNTNNTTTTTTTTTTTTTNTTTTTTTTTNTTTTTTNNTTTTTTTTTTNT
TTTTTTTTTNTNNTTTTTTTNTTNTTTTTTTNTTTTTTTTTNNTTTTTTT
TTTTTTTTTTTTTTTTNTTTTTTTTTTTTNTTTTTTTTNNTTTTTTTTTT
NTTTTTTTTTNTTNTTN

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATAGAAGAGAAATACTTACCTTACTCCGTT
GACTCCAGACTGGGTTTTTGGTTGTTCCAGTGGGGAAAGAGCAGGTTCTC
TGCAGAAGTTTGGCCCTGGAGCCCATACATACAGATGCTCCCTTGGTTTC
AGTGGCAACTTGGACTTCAGCCCTGGGAGATGCATGGAGCGTGCAAGGCT
CTGAGTCCCCTTCTCACTCCGTTTTCCTTATGTGTCTGTCTCCTTCTCTC
TAGACGGTTCTGCCTCCCAGGCTCAGCAGCTTCCCAGCTCTCAGGTTCTG
TGGCCCGACGAAGCTGTCTGCCTCCGCAAGAAGAAGAGACACTCTCGTCC
TGATCCCTTTGCCCGGCTCTCAGACTTGTGCCACCGTCAGCTTCCGGAAG
ACCAGACAGCAATCCTCAACAGCGTGGATCATGATGACCCAGGCCACGCT
ACTCTGCTATGACGTGACATCACTCTAAATGTCCCCAGGGTGGGGTGCTA
GGCTAAAGGGGTGGAGAGGGACCATTGTACAGGGGCCTGTCCTCCTCTGC
CTATCATGGGATGGCTCAGGCCCTTTGCCTTGGGGGGGCCATTGTCCCTC
GGGCCAGGGGGGAACTCTGGCCCCCAAATTAAGCCAGTTAATTTTGTTCC
TGGGAAAAAAAATGGGGGAAAAAATTTTTATTGTGGGTTCTAAATGGGAA
TTTATGGTGAATGGAAAAATCTTTTTCTTN

Query= MSMg01no421_f07.g1 MSMg01no421_f07.g1 CHROMAT_FILE:
MSMg01no421_f07.g1 PHD_FILE: MSMg01no421_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:28 2005
         (495 letters)



>mm_chr9_27152921_27153816
          Length = 896

 Score =  936 bits (484), Expect = 0.0
 Identities = 493/496 (99%), Gaps = 1/496 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagaagag-aaatacttaccttactccgttgactccagactgggtttttggttgttcca 59
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagaagagaaaatacctaccttactccgttgactccagactgggtttttggttgttcca 260

                                                                       
Query: 60  gtggggaaagagcaggttctctgcagaagtttggccctggagcccatacatacagatgct 119
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gtggggaaagagcaggttctctgcagaagtttggccctggagcccatacgtacagatgct 320

                                                                       
Query: 120 cccttggtttcagtggcaacttggacttcagccctgggagatgcatggagcgtgcaaggc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccttggtttcagtggcaacttggacttcagccctgggagatgcatggagcgtgcaaggc 380

                                                                       
Query: 180 tctgagtccccttctcactccgttttccttatgtgtctgtctccttctctctagacggtt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgagtccccttctcactccgttttccttatgtgtctgtctccttctctctagacggtt 440

                                                                       
Query: 240 ctgcctcccaggctcagcagcttcccagctctcaggttctgtggcccgacgaagctgtct 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcctcccaggctcagcagcttcccagctctcaggttctgtggcccgacgaagctgtct 500

                                                                       
Query: 300 gcctccgcaagaagaagagacactctcgtcctgatccctttgcccggctctcagacttgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctccgcaagaagaagagacactctcgtcctgatccctttgcccggctctcagacttgt 560

                                                                       
Query: 360 gccaccgtcagcttccggaagaccagacagcaatcctcaacagcgtggatcatgatgacc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccaccgtcagcttccggaagaccagacagcaatcctcaacagcgtggatcatgatgacc 620

                                                                       
Query: 420 caggccacgctactctgctatgacgtgacatcactctaaatgtccccagggtggggtgct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggccacgctactctgctatgacgtgacatcactctaaatgtccccagggtggggtgct 680

                           
Query: 480 aggctaaaggggtgga 495
           ||||||||||||||||
Sbjct: 681 aggctaaaggggtgga 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space:   429710
Effective search space used:   429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)