XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
GGTAGGTTCCACCCCCTCTCCCAGTGGGAAGCACTCCTTATCTGCTACGC
CAATGCTAGCCCAGCATGCATGTGAGAGGGTCAGGCAAACTATACACCCA
GCCTTAGTTCTGAATGAGAAAATCAATATTCCACAGTGTAATTCACTAGT
CAGAAGTAATTGCCCACCCAGACAACAACAGCACAAGGACAGTAAATTCA
TTACAAGCTTGTTGCCACCCCCGGCAGGGACTTCAATGCTGCTGTTTCAC
AAATCCTACAGATACTCTGCTTCCTGGTCACACTTCCACGAATCCCTGTC
CTTTGTCCACCTAGATAATGGAAGGACCATGGCTCCAAATGCTGGAATCC
TAGCAGGATTTGTATTAGGAACTCATCATTCCTTGATATTAAATATTGTT
TAATAGGAATCAGTGAGATGGAACTCATAGCAAATGGTAGAGTGAGCCCC
CAAGAAGTCTCAGCCTGATGAACAGAATGTACACACTTAACAAGATTGAC
GCATGCTCTGAACTGTCAAATGCAAAAGTCTCTCTAGCTCAATAGCTCAG
GAACCTTCCTCAACAATGTCTCACACATCTACACATTTCCCTGCATGCCC
TATCGTCTCTGCATCCCCTCCCACCAGCATAGCCTCCCTGTGCCCTAAAA
AGGTAAGTTTGCGGCCTGTCTATAAACAGATTTCCGAAAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAGGTCCAGGAGGTGGGAGTGGGTAGGTTGG
GGAGCAGGGTAGGGGTGCCCCCTCTCCTCTCTCTCTTCTCTCCTCTCCTT
TTGTTCCTTTTTCTTTTTGTGGGCGCCCCTCTTTTTCTCTCTTCCTTCTC
CTTCTTTCCTGTGCTGTCTGCCCCCTTTTCCCTCCCCCCTTCCTTTCTTT
TTTCTTTCCTTCTTTCTCCTTCTTTTCCCTGTTTCCCCTTTCTTTCCTTT
TTCTCTTTCTTCCTTCCTCTCTTCTCCTCTTTCCTCTTTTTTCCCCCCTA
CTTTTCTTTTCTCTTTTCGCTCTTTTTCTTATCTTCTACTCCTCTTTTTT
TTTCTTCTTCTCCCTCTCTTTACGTCTTCTTGGGTTTATTGTCTTCCCCC
CCCCCCCTTTTCGTCTTTCCTTTCTTTTCCCTCTTCCTCCCCCCTTCTAT
TTCCATTCTTCTTCCTCCCCCCTTCCTCTCTTACTCCCCTTACGCCTTTT
CCCTCTGTTCCCGACCTCTATTCGCCGCCTCACTTCCTCTTTTTTCAATT
TTCTCCTACCCTTTATCCTTTCTCTTCTTCTTCTAGTCTCCCTCCCTTCT
CCGCTTATTTCCTTCCTTCTCTATCGTCTTTCTTTGTTCCCTCTCTCCTT
CTTCCTCGTTTACCGCCCCTTTTATTCCTCATCGCTCCTTGTCCATTTGA
TTCCTCTCCCCTTTCTTTTTCTCTACCTGTTTTTTCTCGGTGATATTCTT
TTCTTACTCCTTTTTGATGTCTCTCAATTCCTTGTCGCGCCCGGTTTTCT
CCTCCCCTCTCAACTTTT

Query= MSMg01no425_d06.b1 MSMg01no425_d06.b1 CHROMAT_FILE:
MSMg01no425_d06.b1 PHD_FILE: MSMg01no425_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:21 2005
         (576 letters)



>mm_chr9_28795565_28796540
          Length = 976

 Score = 1083 bits (560), Expect = 0.0
 Identities = 569/572 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgggtaggttccaccccctctcccagtgggaagcactccttatctgctacgcca 64
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaattctgggtaggttccactccctctcccagtgggaagcactccttatctgctacgcca 717

                                                                       
Query: 65  atgctagcccagcatgcatgtgagagggtcaggcaaactatacacccagccttagttctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atgctagcccagcatgcatgtgagagggtcaggcaaactatacacccagccttagttctg 657

                                                                       
Query: 125 aatgagaaaatcaatattccacagtgtaattcactagtcagaagtaattgcccacccaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aatgagaaaatcaatattccacagtgtaattcactagtcagaagtaattgcccacccaga 597

                                                                       
Query: 185 caacaacagcacaaggacagtaaattcattacaagcttgttgccacccccggcagggact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 596 caacaacagcacaaggacagtaaattcattacaagcttgttgccacccctggcagggact 537

                                                                       
Query: 245 tcaatgctgctgtttcacaaatcctacagatactctgcttcctggtcacacttccacgaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tcaatgctgctgtttcacaaatcctacagatactctgcttcctggtcacacttccacgaa 477

                                                                       
Query: 305 tccctgtcctttgtccacctagataatggaaggaccatggctccaaatgctggaatccta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tccctgtcctttgtccacctagataatggaaggaccatggctccaaatgctggaatccta 417

                                                                       
Query: 365 gcaggatttgtattaggaactcatcattccttgatattaaatattgtttaataggaatca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcaggatttgtattaggaactcatcattccttgatattaaatattgtttaataggaatca 357

                                                                       
Query: 425 gtgagatggaactcatagcaaatggtagagtgagcccccaagaagtctcagcctgatgaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtgagatggaactcatagcaaatggtagagtgagcccccaagaagtctcagcctgatgaa 297

                                                                       
Query: 485 cagaatgtacacacttaacaagattgacgcatgctctgaactgtcaaatgcaaaagtctc 544
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cagaatgtacacacttgacaagattgacgcatgctctgaactgtcaaatgcaaaagtctc 237

                                           
Query: 545 tctagctcaatagctcaggaaccttcctcaac 576
           ||||||||||||||||||||||||||||||||
Sbjct: 236 tctagctcaatagctcaggaaccttcctcaac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)