Query= MSMg01no426_g06.b1 MSMg01no426_g06.b1 CHROMAT_FILE:
MSMg01no426_g06.b1 PHD_FILE: MSMg01no426_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:54 2005
(440 letters)
>mm_chr9_16218828_16219658
Length = 831
Score = 758 bits (392), Expect = 0.0
Identities = 423/438 (96%), Gaps = 11/438 (2%)
Strand = Plus / Plus
Query: 4 ggaattctccaaagaatacctgatcttgtagactctgacctcctgaatggcctggtctct 63
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccaaagaaaatttgatcttgtagactctgacctcctgaatggcctggtctct 263
Query: 64 tgagggatcctatctaatgggatatctgggcagagatgggaagaaaaaatatcattggga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgagggatcctatctaatgggatatctgggcagagatgggaagaaaaaatatcattggga 323
Query: 124 catgtctctggggacaacatgctgttctgctcccttctgatgccccttcctgggctttgc 183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgtctctggggaca---tgctgttctgctcccttctgatgccccttcctgggctttgc 380
Query: 184 agctgccttgatgtgaactgctctgatttaccataccctcaccaccatgaaggaatgaat 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgccttgatgtgaactgctctgatttaccataccctcaccaccatgaaggaatg--- 437
Query: 244 gttggctttgaaatcttgggtagattgtaacatacaggaaaacacgggtccatctaatgt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 -ttggctttgaaatcttgggtagattgtaacatacaggaaaacacgggtccatctaatgt 496
Query: 304 aaagaagctagtgacaatgttggggttcgtgaggagaagaacagacttgaaaacctagaa 363
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 497 aaagaagctagtgacaatgttggggttcatgaggagaa---cagacttgaaaacctagaa 553
Query: 364 gctattgcactctaggaatcctgatcagaacattttaatcaggatcaaaaaa-taataaa 422
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 554 gctattgcactctaggaatcctgatcagaacattttaatcaggatcaaaaaaataataaa 613
Query: 423 acatttctcttttatgtg 440
||||||||||||||||||
Sbjct: 614 acatttctcttttatgtg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 831
Length adjustment: 9
Effective length of query: 431
Effective length of database: 822
Effective search space: 354282
Effective search space used: 354282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_g06.g1 MSMg01no426_g06.g1 CHROMAT_FILE:
MSMg01no426_g06.g1 PHD_FILE: MSMg01no426_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:54 2005
(456 letters)
>mm_chr9_16341525_16342380
Length = 856
Score = 851 bits (440), Expect = 0.0
Identities = 452/456 (99%)
Strand = Plus / Minus
Query: 1 tatgcatttcaaggctgcattgaatcaatatttcagtggagactttgagaccagtaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tatgcatttcaaggctgcattgaatcaatatttcagtggagactttgagaccagtaacat 597
Query: 61 atagaaaatgagggtttctttacttaattccagctataacttctagcttattcatctcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atagaaaatgagggtttctttacttaattccagctataacttctagcttattcatctcct 537
Query: 121 ttatttctcttatcacaaaatatattagcatacaattgtcaaatctcagtatttctgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttatttctcttatcacaaaatatattagcatacaattgtcaaatctcagtatttctgttc 477
Query: 181 ctttacatctaacagtctagttagtatccatgcattcttatgaaccattatatctggctc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctttacatctagcagtctagttagtatccatgcattcttatgaaccattatatctggctc 417
Query: 241 acagactttctacaaacagatgacagcccccaaatcttaacatgtgccttgtgcagtctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 acagactttctacaaacagatgacagcccccaaatcttaacatgtgccttgtgcagtctc 357
Query: 301 tcaaatgcctatggattcttaatgtggggtaaaaaatatcttgggccatatgtttaaata 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcaaacgcctatggattcttaatgtggggtaaaaaatatcttgggccatatgtttaaata 297
Query: 361 ttagcatctgtaaagccaaagagagaatgtgacttgtagttatgacaagctacctgacca 420
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 296 ttagcatctgtaaagccaaagagagaatgtgacttgtagttgtgacaagctaactgacca 237
Query: 421 ggccaatcgatagaattaaaaataaatctacctaag 456
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggccaatcgatagaattaaaaataaatctacctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
