Query= MSMg01no426_h11.b1 MSMg01no426_h11.b1 CHROMAT_FILE:
MSMg01no426_h11.b1 PHD_FILE: MSMg01no426_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:01 2005
(234 letters)
>mm_chr9_118561928_118562559
Length = 632
Score = 371 bits (192), Expect = e-107
Identities = 216/224 (96%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 1 actctggcatgtccccaggtgacagggatagaattattgtttacagctagggcatttttt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 201 actctggtatgtccccaggtgacagggatagaattattgtttacagctaggaca-ttttt 259
Query: 61 taagcactgtttttttctatcagaaatacacttccttattttgtgcatgtgcatatgtgt 120
|| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taggcactg-ttttctctatcagaaatacacttccttattttgtgcatgtgcatatgtgt 318
Query: 121 atgggtaagcctattgtggctcgtgtatggaggtcaaagggcaacttgcacaagttggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgggtaagcctattgtggctcgtgtatggaggtcaaagggcaacttgcacaagttggtt 378
Query: 181 ctcttcttccaccatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 224
||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 379 ctcttcttccaccatgtgtatatgtgtgtgtgtgtgtgtgtgtg 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 632
Length adjustment: 9
Effective length of query: 225
Effective length of database: 623
Effective search space: 140175
Effective search space used: 140175
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_h11.g1 MSMg01no426_h11.g1 CHROMAT_FILE:
MSMg01no426_h11.g1 PHD_FILE: MSMg01no426_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:01 2005
(421 letters)
>mm_chr9_118770298_118771118
Length = 821
Score = 766 bits (396), Expect = 0.0
Identities = 414/420 (98%)
Strand = Plus / Minus
Query: 1 caaaggggaaacccgttcccatcatcccaagctccatgaggtaagcacagagaaggctat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caaaggggaaacccattcccatcatcccaagctccatgaggtaagcacagagaaggctat 561
Query: 61 aactatgtttagtccccacctcccaatgcgccagtttttcatatcagtaaggacctcaac 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 560 aactatgtttagtccccacctcccaatgcaccagtttttcatatcagtaaggacctcaac 501
Query: 121 tagagagttttgttgttgaaatggaaaggataaacgagggcacaaaacatctgttcacag 180
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 tacagagttttgttgttgaaatggaaaggataaacaagggcacaaaacatctgttcacag 441
Query: 181 taacagctcccttgagatctgcagagctggggacggagcacggccaccaggacagcctag 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 taacagctcccttgagatctgcagagctggggacggagcacagccaccaggacagcctag 381
Query: 241 gtccttttattctagaaagaaagggacactgagcatactgtattcttttacttaattgtg 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtccttttattctagaaagaaagcgacactgagcatactgtattcttttacttaattgtg 321
Query: 301 tatgtggttcggtgacaggaaccttgaccagttcgctgtaccaagagagtaaatgtaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatgtggttcggtgacaggaaccttgaccagttcgctgtaccaagagagtaaatgtaaaa 261
Query: 361 tcctgaagacgttgtagctttggctttgatgccttctttctaattgaaaactatctccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcctgaagacgttgtagctttggctttgatgccttctttctaattgaaaactatctccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
