Query= MSMg01no426_h20.b1 MSMg01no426_h20.b1 CHROMAT_FILE:
MSMg01no426_h20.b1 PHD_FILE: MSMg01no426_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:02 2005
(445 letters)
>mm_chr9_22520116_22520960
Length = 845
Score = 806 bits (417), Expect = 0.0
Identities = 435/441 (98%)
Strand = Plus / Minus
Query: 5 gaattctctcctatatcttcctacatgcaacgttttccagtctcctcgtgccaatgtttt 64
||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 645 gaattctctcctacattttcctacatgcaatgttttccagtctcctcgtgccaatgtttt 586
Query: 65 tctctacaagctggaccatataaacctctgggtttattttagtctaagtttgataaatgt 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tctctacaagccggaccatataaacctctgggtttattttagtctaagtttgataaatgt 526
Query: 125 tacctaaagcaagtcttcctttttgttttaacaccaaaaattagatccacatttatttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tacctaaagcaagtcttcctttttgttttaacaccaaaaattagatccacatttatttga 466
Query: 185 aagaattcaaagtccttgtgcttgtattcttacaagacttccctccccagcaggccgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aagaattcaaagtccttgtgcttgtattcttacaagacttccctccccagcaggccgcca 406
Query: 245 acggaaggtcaagcagggtctcagaagtaggcggcaaaagtccctggcttagcgattcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acggaaggtcaagcagggtctcagaagtaggcggcaaaagtccctggcttagcgattcag 346
Query: 305 tgtggcctgcttgggtgctccatgagaaggcaatgtcaactgagcttgcttgggccccaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgtggcctgcttgggtgctccatgagaaggcaatgtcaactgagcttgcttgggccccaa 286
Query: 365 aagtgttttcttactcctcattccttccagcctctctctgccagtgccttcagtttctgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 285 aagtgttttcttactcctcattccttccagcctctctctgccagtgccttcggtttctgg 226
Query: 425 ggcttttgaggaaggctgacc 445
| |||||||||||||||||||
Sbjct: 225 gccttttgaggaaggctgacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_h20.g1 MSMg01no426_h20.g1 CHROMAT_FILE:
MSMg01no426_h20.g1 PHD_FILE: MSMg01no426_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:03 2005
(462 letters)
>mm_chr9_22349445_22350305
Length = 861
Score = 795 bits (411), Expect = 0.0
Identities = 450/463 (97%), Gaps = 3/463 (0%)
Strand = Plus / Plus
Query: 1 ctaactgcgctgtatataaactcagtgctttctggacctgtcttcttgtgccagcaccta 60
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctaactgcgctgtatataaactcaatgctttctggacctgtcatcttgtgccagcaccta 260
Query: 61 tgttgtaggtggggggcttgcaatctgagttaagacttgaaataataaaaagactctttt 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgtaggtggggg-cttgcaatctgagttaagacttgaaataataaaaagactctttt 319
Query: 121 acaaattgcagcagactttgcaattctgcaattcttgggttcgtctgggtttcccacaga 180
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 gcaaattgcagcagactttgcaattctgcaattcttgggtttgtctgggtttcccacaga 379
Query: 181 ctcagggcataacaccatcaggtcaccaggcttgtgtggcaagtgcctttatccac-gga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 380 ctcagggcataacaccatcaggtcaccaggcttgtgtggcaagtgcctttatccactgga 439
Query: 240 accatctcagcagccctctttctagactttgagacagggttatgtgatgcagcccaggct 299
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 440 -ccatctcagcagccctctttctagtctttgacacagggttatgtgatgcagcccaggct 498
Query: 300 agccttcatctcatgatcttcagcctcagcctcctgggcatgtgctacatgtccagctca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agccttcatctcatgatcttcagcctcagcctcctgggcatgtgctacatgtccagctca 558
Query: 360 gtggggctctaataacactgaatgtgaggaagagatgctgcgggtccctgatcctgtgtc 419
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 559 gtggggctctaataacactgaatgtgaggaagagatactgtgggtccctgatcctgtgtc 618
Query: 420 ctacgtgtccatgcaagccctgcccgtgtccttccccgctcct 462
|| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 619 ctgcgtgtccacgcaagccctgcccgtgtccttccccgctcct 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 861
Length adjustment: 10
Effective length of query: 452
Effective length of database: 851
Effective search space: 384652
Effective search space used: 384652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
