Query= MSMg01no429_k12.b1 MSMg01no429_k12.b1 CHROMAT_FILE:
MSMg01no429_k12.b1 PHD_FILE: MSMg01no429_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(575 letters)
>mm_chr9_74133884_74134859
Length = 976
Score = 1075 bits (556), Expect = 0.0
Identities = 568/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 taagtactcctttgggagagtgaagtggagagataaatgtggctgtctccagggtatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagtactcctttgggagagtgaagtggagagataaatgtggctgtctccagggtatgtt 260
Query: 61 cccccagacagcactgtcacaggtcccctctgagaagagctgatttgttcatagtcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccccagacagcactgtcacaggtcccctctgagaagagctgatttgttcatagtcttcc 320
Query: 121 tgccatgtagggggcagcaacacccaaggttagaaaataacagtctcattccctggctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccatgtagggggcagcaacacccaaggttagaaaataacagtctcattccctggctct 380
Query: 181 ggttcaaaacatattctaactgg-aaaaaaaaaatccttgtagaagggaaagggcttaaa 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttcaaaacatattctaactgggaaaaaaaaaatccttgtagaagggaaagggcttaaa 440
Query: 240 gcacaaagattaattcctctctgtcctcccctatctctaaagcactattttaaggttata 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacaaagacaaattcctctctgtcctcccctatctctaaagcactattttaaggttata 500
Query: 300 cttaaacccgttcccataacttggagacatctgtcacttccctcaatacggaagtcatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaaacccgttcccataacttggagacatctgtcacttccctcaatacggaagtcatat 560
Query: 360 tctcctcctgttcagactgatagaatttgtttctgcttctatgtttactagagtctgatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcctcctgttcagactgatagaatttgtttctgcttctatgtttactagagtctgatt 620
Query: 420 tctttcccttctcctgactggagcctttctccagcgaaaggaaggaaactgcttccatcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctttcccttctcctgactggagcctttctccagcgaaaggaaggaaactgcttccatcc 680
Query: 480 cagactctctatgcttctagggaaacggagcaaggtcatctatgtacacacctggaggca 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 cagactctctatgcttctagggaaatggagcaaggtcatctatgtacacacctggaggca 740
Query: 540 gggccgggggaagaactggagaactgtcttga 571
||||||||||||||||||||||||||||||||
Sbjct: 741 gggccgggggaagaactggagaactgtcttga 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 976
Length adjustment: 10
Effective length of query: 565
Effective length of database: 966
Effective search space: 545790
Effective search space used: 545790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_k12.g1 MSMg01no429_k12.g1 CHROMAT_FILE:
MSMg01no429_k12.g1 PHD_FILE: MSMg01no429_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:12 2005
(247 letters)
>mm_chr9_74318249_74318895
Length = 647
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Minus
Query: 1 agtgtgtcctagtggttattagcggtattgacttgggacttacagtgaatttgcagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 337 agtgtgtcctagtggttattagcggtattgacttgggacttacagtgaatttgcaacact 278
Query: 61 tacaggccaatgagatagaagtttcataaaactcactgtagggtacacaaatctaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tacaggccaatgagatagaagtttcataaaactcactgtagggtacacaaatctaaatgt 218
Query: 121 gtttgaaatgacactttgataggctcgcaagtagcccaggctggcctcaaagtagctatg 180
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 217 gtttgaaatgacactttgataggcttgcaagtagcccaggctgacctcaaagtagctatg 158
Query: 181 tagccataaatgactttgaagtgtgattcccctgttttcacctcctaagagttgtaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tagccataaatgactttgaagtgtgattcccctgttttcacctcctaagagttgtaattg 98
Query: 241 aggtg 245
|||||
Sbjct: 97 aggtg 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
