Query= MSMg01no430_m23.b1 MSMg01no430_m23.b1 CHROMAT_FILE:
MSMg01no430_m23.b1 PHD_FILE: MSMg01no430_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:50 2005
(374 letters)
>mm_chr9_88294516_88295286
Length = 771
Score = 640 bits (331), Expect = 0.0
Identities = 360/371 (97%), Gaps = 7/371 (1%)
Strand = Plus / Minus
Query: 6 gaattctttgtaattaacgaattgtgggctttactttttacttatttattttgccccaag 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctttgtaattaaagaattgtgggctttactttttacttatttattttgccccaag 512
Query: 66 taaatataatggtgtttctgtggatct-aggcataatcacaaatgagacttttg-aaaaa 123
||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 511 taaatataatggtgtttctgtggat-tgaggcataatcacaaatgagacttttgaaaaaa 453
Query: 124 gctgtagttcaaaacctatattgttttatagactctaaattctagagactggaatgacta 183
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 452 gctgtagtccaaaacctatattgttttatagactctaaattctagagactggaatggcta 393
Query: 184 tgtaaggtctagagattttagtatttttattttcatctggaaatatgttcatcagagctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtaaggtctagagattttagtatttttattttcatctggaaatatgttcatcagagctt 333
Query: 244 ataatatctaaaactgttactttttaaaaaaaaacctgcatgtttgctttttaactgtat 303
||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 332 ataatatctaaaactgttacttt---aaaaaaaac-tgcatgcttgctttttaactgtat 277
Query: 304 gtttgtttagataaaaatagtctagtttgtttctagtactatttaccacttactaatagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtttgtttagataaaaatagtctagtttgtttctagtactatttaccacttactaatagt 217
Query: 364 tttctagcttt 374
|||||||||||
Sbjct: 216 tttctagcttt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 771
Length adjustment: 9
Effective length of query: 365
Effective length of database: 762
Effective search space: 278130
Effective search space used: 278130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_m23.g1 MSMg01no430_m23.g1 CHROMAT_FILE:
MSMg01no430_m23.g1 PHD_FILE: MSMg01no430_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:51 2005
(389 letters)
>mm_chr9_88169080_88169869
Length = 790
Score = 712 bits (368), Expect = 0.0
Identities = 383/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 cagaaagggatctcagaagacagcgtaaggaaggctcactggggctttccagtcaagctg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaagggatctcagaagacaacgtaaggaaggctcactggggctttccagtcaagctg 260
Query: 61 agagactcccaggtgtcagcctcaatccagcacagaaagccctcagcaaggccaggtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagactcccaggtgtcagcctcaatccagcacagaaagccctcagcaaggccaggtaga 320
Query: 121 aacattcatttgtttctctaagctaatacaatacatccttctaggtcatagtcccaaaaa 180
|||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 321 aacattcatttgtttctctaagctaaaacaatacatccttctaggtcacagttccaaaaa 380
Query: 181 ctgcagaccagaccatttcccgggagtctgatacaagcgtgctgctataaattaaaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcagaccagaccatttcccgggagtctgatacaagcgtgctgctataaattaaaagta 440
Query: 241 aacacagtgggtttagtgagacacaaagcttacagagaaaagtgggaagccctcatcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacagtgggtttagtgagacacaaagcttacagagaaaagtgggaagccctcatcagt 500
Query: 301 gttaaggggaaaagtataaacacggctttgactcaaatcgagagaaa-ggtggaatcaaa 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gttaaggggaaaagtataaacacggctttgactcaaatcgagagaaaaggtggaatcaaa 560
Query: 360 agccaagtggtttgaaatctggaaactt 387
||||||||||||||||||||||||||||
Sbjct: 561 agccaagtggtttgaaatctggaaactt 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 790
Length adjustment: 9
Effective length of query: 380
Effective length of database: 781
Effective search space: 296780
Effective search space used: 296780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
