XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTT
GTGGTTCTTCAATTCTATCCCATTGATCTACCTGTCTGTCTATGTACCAG
TACCATGTAATTTTTTTTTATCACTATTGCTCTGTAGTAGAACTTAAGGA
CGGTGATTCCCCCAGAAGTTCTCTTATTGTTGAGAATAGTTTTCGCTATC
CTGGGTTTTTTGTTGTTCAAATGAATTTGAGAATTGTTCTTACTATCTCT
GTGAAGGATTGAATTGGAATTTTGATGGGGAGTGCATTGAATCTGTAGTT
TGCTTTGGTAAAATAGCCATTTTTACTATGTTAATCCTGCCAATCCATGA
ACATGGGAGATCTGTCCATCTCCTGAGATCTTCAATTTCCTTCTTCAGAG
ACATGAAGTTCTTGTCATACAGATCTTTCACTTGCTTGGTTAGAGTCACT
CCAAGATATTTTGTATAATTTTTGAGTATTGGGAAGGGTGTCACTTCCCT
AATCTCATCCTCTGAGTTGAGGAAGGCTACTCAGNTGTTTGAGTTAATTT
TATATCAAGCCACTTTGCTGAAGTTGTTTACCAACTGACCAAGTTCTCTA
GTGAATTTTTTAGGGCCCTTTGGATACTATCCCTATCCCCCGGAAAAAAA
GAAATTTTGACTTCTTCCTTTTCCAAAGGAACCCCTTGGCCCCCCTTTTT
TTGTTAAATGGCTTGGGGGAAATTTCTATATCTTTTTTGTTAAAAAGGGC
AAAAGAGAAGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTCTGCTAAAATTATTCCTAAGACTGTTTGAGGAT
CACCCTGCTTGGCATTATCTCAAACACACATCTGGTCATGTTTTCAGGAA
AAGTCTGTTTGATAAGTATCTGATATCCTGAATATTGAACTCATGTGGTA
ACAAACCAAAGAAGGTAACTAAGCTGTTAGATGACCATGCTGAAAAAGTG
TATCTTCCAAGTGACAGAACTAATATTAGTATCTTGCTCTTAAAACAAAT
CTCCAAGTCGGCTATGGAAAAAAAAAAAAAAAGAATGGGATATACATTTA
AAGGGCAGTACAAGACAGAGGAAAGTTTGCTAAAGGTAGACAGAGCACAC
ATGCACAACTCCTTGAATTTTGGGGTAACCAGCTTCTCCCCATCTCCATT
CTCTCTGTGTGTGTCTGTGTCTCTCTGTCTCTCTGCTTCTTTGTCTCTGT
TTCTATCTCTCTGTGNGTTTCATAATATATATTAATATGTAATAAGTTAA
AAGTTTATATGAATTTTCAACAGATGAGTAACTAACTTTGAAAAAGTATA
CTGACATAACTATAATTGAGAATTTATTCTTTCCTAAATATCTATAGATA
AACATGTTTTTGGCTATAGAATTTATTTTATTAAATGCCGAAGCCTTCCT
CCACTTACTTATTGCGAAACTGGCTTCTTACCGGGGGGAATAATAAAAAA
AGGATATTTTAATCCATT

Query= MSMg01no431_n23.g1 MSMg01no431_n23.g1 CHROMAT_FILE:
MSMg01no431_n23.g1 PHD_FILE: MSMg01no431_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:23 2005
         (449 letters)



>mm_chr9_25676913_25677764
          Length = 852

 Score =  812 bits (420), Expect = 0.0
 Identities = 442/452 (97%), Gaps = 7/452 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgctaaa-attattcctaagactgtttgaggatcaccctgcttggcattatctcaaa 59
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttctgctaaagattattcctaagactgtttgaggatcaccctgcttggcattatctcaaa 530

                                                                       
Query: 60  cacacatctggtcatgttttcaggaaaagtctgtttgataagtatctgatatcctgaata 119
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cacgcatctggtcatgttttcaggaaaagtctgtttgataagtatctgatatcctgaata 470

                                                                       
Query: 120 ttgaactcatgtggtaacaaaccaaagaaggtaactaagctgttagatgaccatgctgaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttgaactcatgtggtaacaaaccaaagaaggtaactaagctgttagatgaccatgctgaa 410

                                                                       
Query: 180 aaagtgtatcttccaagtgacagaactaatattagtatcttgctcttaaaacaaatctcc 239
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 409 aaagtgtatcttccaagtgacagaactaatattattatcttgctcttaaaacaaatctcc 350

                                                                       
Query: 240 aagtcggctatgg--aaaaaaaaaaaaaaagaatgggatatacatttaaagggcagtaca 297
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aagtcggctatggaaaaaaaaaaaaaaaaagaatgggatatacatttaaagggcagtaca 290

                                                                       
Query: 298 agacagaggaaagtttgctaaaggtagacagagcacacatgcacaactccttgaattttg 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agacagaggaaagtttgctaaaggtagacagagcacacatgcacaactccttgaattttg 230

                                                                       
Query: 358 gggtaaccagcttctccccatctccattctctctgtgtgtgtctgtgtctctctgtctct 417
           |||||||||||||||||||||||||||||||||||||||| ||||||    |||||||||
Sbjct: 229 gggtaaccagcttctccccatctccattctctctgtgtgtttctgtg----tctgtctct 174

                                           
Query: 418 ctgcttctttgtctctgtttctatctctctgt 449
           ||||||||||||||||||||||||||||||||
Sbjct: 173 ctgcttctttgtctctgtttctatctctctgt 142


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 852
Length adjustment: 10
Effective length of query: 439
Effective length of database: 842
Effective search space:   369638
Effective search space used:   369638
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)