Query= MSMg01no432_b02.b1 MSMg01no432_b02.b1 CHROMAT_FILE:
MSMg01no432_b02.b1 PHD_FILE: MSMg01no432_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:39 2005
(550 letters)
>mm_chr9_10448835_10449784
Length = 950
Score = 640 bits (331), Expect = 0.0
Identities = 380/413 (92%), Gaps = 28/413 (6%)
Strand = Plus / Minus
Query: 4 ggaattcagaacttttgtctgaatcttttacaggggtcccataaagaaaattatttctct 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggaatttagaacttttgtctgaatcttttacaggggtcccataaagaaaattatttctct 354
Query: 64 ggccataccgactcaggacagcacacaaaagcacagtcaggtcttattattctatgtctg 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 353 ggccataccgactcaggacagcacacaaaagcacagtcgggtcttattattctatgtctg 294
Query: 124 tgtgctgcaaaaaaggccagaaggagttatttctttattgccttactgcttccaatcaat 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 293 tgtgctgcaaaaaaggccagaaggagttatttctttaatgccttactgcttccaatcaat 234
Query: 184 gatctaagaaatggtcaccacctggttcccctctcttctgtctctttctgtctttctctg 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ggtctaagaaatggtcaccacctggttcccctctcttctgtctctttctgtctttctctg 174
Query: 244 tctctgtctct------------ctct--ctctgt--------------ttcacacacac 275
||||||||||| |||| |||||| |||||||||||
Sbjct: 173 tctctgtctctttttctatttgtctctgtctctgtctctctctctctctttcacacacac 114
Query: 276 acacacacacacacacacacacacacgaaaagatcacatgaaagggtcacaaagtagaaa 335
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 113 acacacacacacacacacacacacacgaaaagatcacatgaaagggtcacagagtagaaa 54
Query: 336 tagggaacatggtacaatgaggttgtgtattcagctgagattgtaggagttaa 388
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tagggaacatggtacaatgaggttgtgtattcagctgagattgtaggagttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b02.g1 MSMg01no432_b02.g1 CHROMAT_FILE:
MSMg01no432_b02.g1 PHD_FILE: MSMg01no432_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:39 2005
(459 letters)
>mm_chr9_10322648_10323506
Length = 859
Score = 820 bits (424), Expect = 0.0
Identities = 448/456 (98%)
Strand = Plus / Plus
Query: 1 ctatggaatacatgtaattagaagacatgtcaggagaaagtgtgtggaaactgcatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatggaatacatgtaattagaagacatgtcaggagaaagtgtgtggaaactgcatcatt 260
Query: 61 tgcaagtcattcttggctacatggagttcccctggtctcaggttttacatgagccttaat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tgcaagtcattcttggctacatgcagttcccctggtctcaggttttacatgagtcttaat 320
Query: 121 aacagcagctggacttctactgtcttcttagacattgtcaccatggcaactacattttat 180
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aacagcagctggacttctaccgtcttcctagacattgtcaccatggcaactacattttat 380
Query: 181 gagggtttgagatctaaaaaggaaaagctgtcatcacctgcagtttgtagtagttgatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagggtttgagatctaaaaaggaaaagctgtcatcacctgcagtttgtagtagttgatgt 440
Query: 241 gaatcttaatacataaataaatagggttctcagtaaagcaagtttgacttgaggctaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 441 gaatcttaatacataaataaatagggttctcagtaaagcaagtttgacttggggccaggt 500
Query: 301 attttggtaaagatagcttttcttttctttctttctttctttttttattttttgttttta 360
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 attttgttaaagatagcttttcttttctttctttctttccttttttattttttgttttta 560
Query: 361 gatagcttttcctaatatcattatgaaagatattttaagtgacaaacggtgatattactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatagcttttcctaatatcattatgaaagatattttaagtgacaaacggtgatattactc 620
Query: 421 cttggcttataaattctagcaacactccccttctta 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttggcttataaattctagcaacactccccttctta 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
