Query= MSMg01no433_m12.b1 MSMg01no433_m12.b1 CHROMAT_FILE:
MSMg01no433_m12.b1 PHD_FILE: MSMg01no433_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:58 2005
(233 letters)
>mm_chr9_50158116_50158750
Length = 635
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 1 atgactttctcaagaaacccatacccatgtgctttcccccacccccaccccccgaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgactttctcaagaaacccatacccatgtgctttcccccacccccaccccccgaaacac 260
Query: 61 catgttttgtagctcaggctagcttaaacttacactatagccaatgatgaccaaaaa-tg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 catgttttgtagctcaggctagcttaaacttacactatagccaatgatgaccaaaaaatg 320
Query: 120 gagagatacgggggagacagtagattgagatgtaaagaccagagttattttctatttcta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gagagatacgggggagacagtagattgagatgtaaagaccagagttattttcaatttcta 380
Query: 180 ctgtctcccc-gtatctcttcatttttggttctcctcagcagaatcccaagaacc 233
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ctgtctcccccgtatctcttcatttttggttctcctcagtagaatcccaagaacc 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 635
Length adjustment: 9
Effective length of query: 224
Effective length of database: 626
Effective search space: 140224
Effective search space used: 140224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_m12.g1 MSMg01no433_m12.g1 CHROMAT_FILE:
MSMg01no433_m12.g1 PHD_FILE: MSMg01no433_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:58 2005
(172 letters)
>mm_chr9_50330628_50331199
Length = 572
Score = 304 bits (157), Expect = 2e-87
Identities = 168/172 (97%)
Strand = Plus / Minus
Query: 1 aagaagcgccagactgaactgtgacgcatgatggctgtgtttctagaaagctccaggaac 60
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 372 aagaagcgccagactgaactgtgactcgtgatggctgtgtttctagaaagctccaggaac 313
Query: 61 tctctgtttttgtggtatcttccttctgcattcaggggcaaggatacatagtcatgacag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tctctgtttttgtggtttcttccttctgcattcaggggcaaggatacatagtcatgacag 253
Query: 121 gnaactaggtctgaccttgtttcacaaccttgtaaggctgctttgtacagcc 172
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggaactaggtctgaccttgtttcacaaccttgtaaggctgctttgtacagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
