ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAAT
TCTTCTCATGCTAGATGTAAGTCATTTGCCATAGTTAAGTCCAAGGGAAG
AGTTGTGTGCCCAGGATGAAAGTCAGGCCACGACCTTACTAAACCATAGT
GAAATTCCACAATGGCCTAGTTGAGTTTTGTACAGTCTCCCTTCCTCCAA
ATGCCTCACTTTGACCAAACACCTCTCTTTTTAACCCCCCAAATTCTGTG
CCTTTGTAAGCAGTGGCATATAATATTCAATACAATTTTTTTTTCATTTC
TCAGACCTACGACAATCCCCCTCTGCTCTCAAAATCCTGGAAAAACAAAA
ACATGTCAATTGTGACATTAGTTGTACTATTAGTGTCTTGGGAAGAAAGC
CTTTAATCACTTGCCAGGGAAATCTGGGCAGACGGCAAATGAAGGCAAAG
GTAAGGAAGGCATCAAGAGAGGCTTCCAGAACTGAGACAGGGATGGACAT
CATAACCACAAGAAGCCAGCAGAAGTGGGCCACTCAAGAATCCTCCAGAG
TCTTGGGGTGAGTGCCCTTCCCAGAGCGGTGCCACGTTGGCTGCCAAGTT
TCTTTTCCTTTTGTGGGCACAAAACACGGCTAAACTCTTATTTTTTCCCG
GGCCCTTCACCGCATTATTTTTTCTTTCTCCACGTCCTATATCACCTCTT
TATCCCCTCACTCTTCCCCTCGTTTCCCCCCTTTTCTTTTTTTTTCCCCC
CATTTTTTATATCCATTTTTCTCACCTTTCACCC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTAGGGCTAGAAAGATGGTTCAATGGTGA
AGAGCCATATATTTATTATTGATCTTGCAGAGGACCAAGTTTCTTTCTTA
GCACCTGTGTTGGGAGTCTCACAGTATCTGTAACTCTAGCTCCAGAAGGT
CTGATGTCCCATTCCCGCCCCCCCTGCCCCGCCACTCCATAGCAGGCACC
TGACTCCTGTATATGCCACCTCCACTTGAGAGCAAGTTATGAGGAAGCAA
ACCTACCTTATGTTCTTACCCCACATCCCAAGTATCTAGAGTTGTCATTT
ATAAGTCTCAGAAGAGAAAGTGAATTGGCCAGAATCAAAGCCAGTCTTGA
ACCTACTGGACCAAGGCCCAGGATTCTTGGGCTCCAACCTGATGCTGGTT
TCAGCTTTAGTTAAGATCTCATATCCTTGACTAAGTCCCTGTCCTTTCCA
TTTCTGCATCAGTTAATTTAGGAGATCATGTTTCGGCATCTGCCGCTCTG
ACATGCCTGTACTTCTTGGTGGTGGCAGTTTCCGCACGCCGCATTTCTTT
TTTTCTCTTTTGATTTTACCCCTCTCTTTATTCTTTTTATGGTCCCTTTT
TTCGTAGCCTATTCCCCTCTCCCGTTTTTTCTCCCTCGGTCTTTTCTTTG
TATGGTTTGTTTCCTCTCCTTTTTTTTTTCTGTCTTACTCTTGTTTTACC
TCCCACTTGTATCATTTTTGTTTTCCCTCTG

Query= MSMg01no435_n16.b1 MSMg01no435_n16.b1 CHROMAT_FILE:
MSMg01no435_n16.b1 PHD_FILE: MSMg01no435_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
         (424 letters)



>mm_chr9_46610726_46611549
          Length = 824

 Score =  781 bits (404), Expect = 0.0
 Identities = 419/424 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtaagtcatttgccatagttaagtccaagggaagagttgtgtgcccaggatgaaagtc 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtaagtcatttgccatagtcaagtccaagggaagagttgtgtgcccaggatgaaagtc 565

                                                                       
Query: 61  aggccacgaccttactaaaccatagtgaaattccacaatggcctagttgagttttgtaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggccacgaccttactaaaccatagtgaaattccacaatggcctagttgagttttgtaca 505

                                                                       
Query: 121 gtctcccttcctccaaatgcctcactttgaccaaacacctctctttttaaccccccaaat 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 gtctcccttcctccaaatgcctcactttgaccaaacacctttctttttaaccccccaaat 445

                                                                       
Query: 181 tctgtgcctttgtaagcagtggcatataatattcaatacaatttttttttcatttctcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctgtgcctttgtaagcagtggcatataatattcaatacaatttttttttcatttctcag 385

                                                                       
Query: 241 acctacgacaatccccctctgctctcaaaatcctggaaaaacaaaaacatgtcaattgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctacgacaatccccctctgctctcaaaatcctggaaaaacaaaaacatgtcaattgtg 325

                                                                       
Query: 301 acattagttgtactattagtgtcttgggaagaaagcctttaatcacttgccagggaaatc 360
           ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 324 acattagttgtactattagtgtcttgggaagaaagccttcaatcacttgccggggaaatc 265

                                                                       
Query: 361 tgggcagacggcaaatgaaggcaaaggtaaggaaggcatcaagagaggcttccagaactg 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgggcagacagcaaatgaaggcaaaggtaaggaaggcatcaagagaggcttccagaactg 205

               
Query: 421 agac 424
           ||||
Sbjct: 204 agac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space:   338225
Effective search space used:   338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no435_n16.g1 MSMg01no435_n16.g1 CHROMAT_FILE:
MSMg01no435_n16.g1 PHD_FILE: MSMg01no435_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
         (437 letters)



>mm_chr9_46458882_46459718
          Length = 837

 Score =  830 bits (429), Expect = 0.0
 Identities = 435/437 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attagggctagaaagatggttcaatggtgaagagccatatatttattattgatcttgcag 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 attagggctagaaagatggttcaatggtgaagagccatatattgattattgatcttgcag 260

                                                                       
Query: 61  aggaccaagtttctttcttagcacctgtgttgggagtctcacagtatctgtaactctagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaccaagtttctttcttagcacctgtgttgggagtctcacagtatctgtaactctagc 320

                                                                       
Query: 121 tccagaaggtctgatgtcccattcccgccccccctgccccgccactccatagcaggcacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagaaggtctgatgtcccattcccgccccccctgccccgccactccatagcaggcacc 380

                                                                       
Query: 181 tgactcctgtatatgccacctccacttgagagcaagttatgaggaagcaaacctacctta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactcctgtatatgccacctccacttgagagcaagttatgaggaagcaaacctacctta 440

                                                                       
Query: 241 tgttcttaccccacatcccaagtatctagagttgtcatttataagtctcagaagagaaag 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttctcaccccacatcccaagtatctagagttgtcatttataagtctcagaagagaaag 500

                                                                       
Query: 301 tgaattggccagaatcaaagccagtcttgaacctactggaccaaggcccaggattcttgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaattggccagaatcaaagccagtcttgaacctactggaccaaggcccaggattcttgg 560

                                                                       
Query: 361 gctccaacctgatgctggtttcagctttagttaagatctcatatccttgactaagtccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctccaacctgatgctggtttcagctttagttaagatctcatatccttgactaagtccct 620

                            
Query: 421 gtcctttccatttctgc 437
           |||||||||||||||||
Sbjct: 621 gtcctttccatttctgc 637


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)