Query= MSMg01no438_d23.b1 MSMg01no438_d23.b1 CHROMAT_FILE:
MSMg01no438_d23.b1 PHD_FILE: MSMg01no438_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:58 2005
(469 letters)
>mm_chr9_70358621_70359489
Length = 869
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%)
Strand = Plus / Plus
Query: 1 acacattcttaaccacctggtcatctccccaagctgcctcagtggggacataagaactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacattcttaaccacctggtcatctccccaagctgcctcagtggggacataagaactac 260
Query: 61 ttaaatctgaatggctctggcactgagtgctgctggtaatatgctttgaggtgctggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatctgaatggctctggcactgagtgctgctggtaatatgctttgaggtgctggggg 320
Query: 121 gaatcaaacacaggatcttactgcaggcttgggaatgttctcagtgaccaatacggccat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 gaatcaaacacaggatcttactgcaggcttgggaatgttctcagtgaccagtacggccat 380
Query: 181 cccacagagcagaaggcaccattttgctaatgcctcagaaacgtgaaacgatttagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacagagcagaaggcaccattttgctaatgcctcagaaacgtgaaacgatttagagat 440
Query: 241 tttagttgaggtttatttaattggttaatgcagctaacgtcaaactctgaaacctatttg 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttagttgaggtttagttaattggttaatgcagctaacgtcaaactctgaaacctatttg 500
Query: 301 tttcaggtacacaggtaagtacaactcagagcccttcggtatccaccgtgggatagtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcaggtacacaggtaagtacaactcagagcccttcggtatccaccgtgggatagtgtt 560
Query: 361 gaactgggaaatggtgccacctactgaatcattgttaccgaagcaactccacacccaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaactgggaaatggtgccacctactgaatcattgttaccgaagcaactccacacccaggt 620
Query: 421 cattttgaagaatgtgcaatatttgttttctcagaaatgtacatctgag 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattttgaagaatgtgcaatatttgttttctcagaaatgtacatctgag 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_d23.g1 MSMg01no438_d23.g1 CHROMAT_FILE:
MSMg01no438_d23.g1 PHD_FILE: MSMg01no438_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:58 2005
(476 letters)
>mm_chr9_70510642_70511518
Length = 877
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 1 tctgacatcagtgatagtctcagtacctcgtgacgttcactgctgtaaagcaaccaaatc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 314 tctgacatcagtgatagtctcagcacctcgtgacgttcactgctgtaaagcaaccaaatc 255
Query: 61 cagaagcacattcttaattgtttaatgtctctaacttttttag-aaaaaagctccacctg 119
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 254 cagaagcacattcttaattgtttaatgtctctaactttttaagaaaaaaagctccacctg 195
Query: 120 aacgctctagaacaaaaagaagcaaattcacccaagaggggtagatggcaggaaataatc 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaagctctagaacaaaaagaagcaaattcacccaagaggggtagatggcaggaaataatc 135
Query: 180 aaactcagggctgaaatcaaccaagtggaaacaaaaagaactatacaaagaatcaaccaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aaactcagggctgaaatcaaccaagtggaaacaaaaagaactatacaaagaatcaaccaa 75
Query: 240 accaggagctggtttcttgagaaaatcaacaaaatagataaacccttagccaggctaact 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 accaggagctggttccttgagaaaatcaacaaaatagataaacccttagccaggctaact 15
Query: 300 agaggacacagg 311
||||||||||||
Sbjct: 14 agaggacacagg 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 877
Length adjustment: 10
Effective length of query: 466
Effective length of database: 867
Effective search space: 404022
Effective search space used: 404022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
