Query= MSMg01no438_m15.b1 MSMg01no438_m15.b1 CHROMAT_FILE:
MSMg01no438_m15.b1 PHD_FILE: MSMg01no438_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:42 2005
(516 letters)
>mm_chr9_117541815_117542730
Length = 916
Score = 835 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Minus
Query: 1 gggcccctgacacccagcctggaagtaaaagtcagagaatgggatttggtccagggaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gggcccctgacacccagcctggaagtaaaagtcagagaatgggatttggtccagggaaca 373
Query: 61 agaggcctcatgtccaggagaggaggggcgctctcctccgcactcctttaggagaaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agaggcctcatgtccaggagaggaggggcgctctcctccgcactcctttaggagaaacct 313
Query: 121 ttgctcagacacctgctgggctccctagccttgccttacttggctctgcctgtgatggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttgctcagacacctgctgggctccctagccttgccttacttggctctgcctgtgatggcc 253
Query: 181 ccaccttagatggccctgctcactgaggttctgctcctggggtctcctcttctgtgccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccaccttagatggccctgctcactgaggttctgctcctggggtctcctcttctgtgccta 193
Query: 241 tgtggacgtgtgtgctggggcatgagggcgtatgctgggatgtcttcctcagttctccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgtggacgtgtgtgctggggcatgagggcgtatgctgggatgtcttcctcagttctccac 133
Query: 301 tttaaataaaaatcgaaacagggcatcccgctgagcaagagaccatcgcgggtgaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tttaaataaaaatcgaaacagggcatcccgctgagcaagagaccatcgcgggtgaaggat 73
Query: 361 cctgtccttacctgtccagtgctggaattataggcgtgagccatcacacctgtatttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cctgtccttacctgtccagtgctggaattataggcgtgagccatcacacctgtatttttg 13
Query: 421 acatcggttctc 432
||||||||||||
Sbjct: 12 acatcggttctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_m15.g1 MSMg01no438_m15.g1 CHROMAT_FILE:
MSMg01no438_m15.g1 PHD_FILE: MSMg01no438_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:42 2005
(248 letters)
>mm_chr9_117382435_117383081
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 caggattctgtagcttgacaaattatcaatcacaggagtctgtggaacaaagccattctt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 caggattctgtagcttgacaaattatcaatcacaggagtccgtggaacaaagccattctt 260
Query: 61 aaacacaggcacctgaaaaatggtcctcgtccttttgggaaaacctccagcagaaaaatg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactcaggcacctgaaaaatggtcctcgtccttttgggaaaacctccagcagaaaaatg 320
Query: 121 acgggggggaggacagggggagaaaggagcttcaagaaataaggttctgactcagaggga 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgggggg-aggacagggggagaaaggagcttcaagaaataaggttctgactcagaggga 379
Query: 181 cagtcagagtgacagctttacattatggtgggacagcacacagttccaaagtccttctga 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtcagagtgacagctttgcattatggtgggacagcacacagttccaaagtccttctga 439
Query: 241 agcaatg 247
|||||||
Sbjct: 440 agcaatg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
