XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTAGTATCTCGATATGTGGTACCTAGTGTCAAGTCACAGAGTAAATAC
AATCTTGACCCTACTCCAAGGATGAAAACTAATTATCTGAATTTACTCGG
TTAACCTCACCCTCCATTGCTCATCTGAAAAGCAAAGATAAGTTTAATGT
TAAGCATGTGTAGATAAGATGTCAATGAGATAACTTGGTCCATGCTCTAA
GGCTCTTCTTGATTTTTGTTTAATCAGATAAACGACAGAAGAACCCCATT
AACAATAGACATAAATATTACCAGATCAATTTTAATTAGTTTATTTACTA
TGTATATTTATATGTGTTTATTCAGTTATCCCATTTTAACTAGTCTAAGT
CATACAACATTGCTAGTTACTTCTACTTCAACTTAATATGATAGTCTTCC
TTCGATTTCAGGCTGAATCTTCCCATGGGTGACTCTATCCATGAGATCCT
GTCTCCCTATCAGAACTCCTACATCTTACTTCATGCCTCAGCTCATTGGT
CAATTGCTTTTTTATTGATAAGTTGTGCTCCCATACAGTACACAAGACAT
TTCCCCTACATTTCCCCTTTTTAGTCCAAAAAAAAGATCTTTCTCTTTCT
TAAAGAAAATTTCAATAGGGGACCTGAAGGGGTGTGTATACCCCCAGGAA
ACACCAATAATGGTCCATCCACCAGAAGTCCCCCTATAATCCCAGTTAN

ACGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTTCGAGAAAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTTTT
TAATTTTTTTTATTACGTATTTTCCTCAATTACATTTGCAATGCTATCCC
AAAAGTCCCCCATACCCTCTCCCCCTCCCCTCCCCCCCTCCCACTTTTTG
GCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGTATGTCTTTTGG
GCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATAAATATGCA
GCTAGAGTCTTGATAGATTCCCATTTTTAATGGGGTTATTTGATTTTCTG
GATTCTACCTTTTTAAGTTCTTTATATATATATTGGATATTAGTCCCCTA
TCTGATTTACAATACGCAACAATCCTTTTCCACTTTGTCGCCGGCCTTTT
TGTCTTACTGACGGTGTCTTTTGTCCTTGTACAAGTTTTCCCCCTTTATG
ACCCCTACCCTGTTGATTCTTTGCCCTCACACCCCTTTTTCTTTTTTTCC
CATTTTATTCCTTTCTCCCCTGTTACCATCCCCTTTGAAACTTTTTTACC
ATTTTCTTCCCCTATTATAATCACTCGCCCCTGGTCCCTCTCTTTTCTTT
TTTTTTTTTTACCCTTATGCTTAATTCCCCCTCCTTTTTCCGCCCTTTTT
CCACCCTCCTTTTTTGTTCCCCCCCTTATTTTACCCCTCCCCCCCG

Query= MSMg01no439_l13.b1 MSMg01no439_l13.b1 CHROMAT_FILE:
MSMg01no439_l13.b1 PHD_FILE: MSMg01no439_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:55 2005
         (519 letters)



>mm_chr9_11090394_11091312
          Length = 919

 Score =  841 bits (435), Expect = 0.0
 Identities = 465/475 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggtacctagtgtcaagtcacagagtaaatacaatcttgaccctactccaaggatgaaaac 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 675 ggtacctagtgtcaagtcacagagtaaatacaatcttgaccctactcccaggatgaaaac 616

                                                                       
Query: 61  taattatctgaatttactcggttaacctcaccctccattgctcatctgaaaagcaaagat 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 615 taattatctgaatttactcggttaacctcaccctccgttgctcatctgaaaagcaaagat 556

                                                                       
Query: 121 aagtttaatgttaagcatgtgtagataagatgtcaatgagataacttggtccatgctcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagtttaatgttaagcatgtgtagataagatgtcaatgagataacttggtccatgctcta 496

                                                                       
Query: 181 aggctcttcttgatttttgtttaatcagataaacgacagaagaaccccattaacaataga 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aggctcttcttgatttttctttaatcagataaacgacagaagaaccccattaacaataga 436

                                                                       
Query: 241 cataaatattaccagatcaattttaattagtttatttactatgtatatttatatgtgttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 435 cataaatattaccagatcaattttaattagtttatttactatgtatattcatatgtgttt 376

                                                                       
Query: 301 attcagttatcccattttaactagtctaagtcatacaacattgctagttacttctacttc 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 attcagttatcccattttaactagtctaagtcattcaacattgctagttacttctacttc 316

                                                                       
Query: 361 aacttaatatgatagtcttccttcgatttcaggctgaatcttcccatgggtgactctatc 420
           |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 315 aacttaatgtgatagtcttccttcgattttaggctgactcttcccatgggtgactctatc 256

                                                                  
Query: 421 catgagatcctgtctccctatcagaactcctacatcttacttcatgcctcagctc 475
           || |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 255 caagagatcctgtctccctatcaaaactcctacatcttacttcatgcctcagctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)