MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-442H24
Chromosome	9 (Build37)
Map Location	69,308,289 - 69,308,630
singlet/doublet	singlet
Overlap gene	Anxa2
Upstream gene	Rora, 9530091C08Rik, Narg2, EG665815, EG244913
Downstream gene	Foxb1, Bnip2, LOC624164, Gtf2a2, Gcnt3, 6430514L14Rik, Myo1e, Ccnb2, Rnf111
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rora (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19883 MGI:104661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530091C08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320440 MGI:2444034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Narg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93697 MGI:2135947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665815 MGI:3646524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG244913 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244913 MGI:3645765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 473 ESTs, 12 Proteins

name	Anxa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12306 MGI:88246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Foxb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64290 MGI:1927549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bnip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12175 MGI:109327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC624164 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Gtf2a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235459 MGI:1933289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gcnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72077 MGI:1919327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430514L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76886 MGI:1924136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myo1e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71602 MGI:106621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12442 MGI:88311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf111 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93836 MGI:1934919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rora (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305438 GeneID:19883 MGI:104661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAR-related orphan receptor alpha transcript_id : NM_013646.1

name	9530091C08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801720 GeneID:320440 MGI:2444034
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530091C08 gene transcript_id : NM_177159.3

name	Narg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195813 GeneID:93697 MGI:2135947
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NMDA receptor-regulated gene 2 transcript_id : NM_145618.3

name	EG244913 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260009 GeneID:244913 MGI:3645765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 473 ESTs, 12 Proteins product : predicted gene, EG244913 transcript_id : XM_979711.2

name	Anxa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131198 GeneID:12306 MGI:88246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : annexin A2 transcript_id : NM_007585.3

name	Foxb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340606 GeneID:64290 MGI:1927549
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box B1 transcript_id : NM_022378.2

name	Bnip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803471 GeneID:12175 MGI:109327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2/adenovirus E1B interacting protein 1, NIP2 transcript_id : NM_016787.3

name	Bnip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131127 GeneID:12175 MGI:109327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2/adenovirus E1B interacting protein 1, NIP2 transcript_id : NM_001008238.2

name	LOC624164 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94386203 GeneID:624164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical LOC624164 transcript_id : XM_888685.2

name	Gtf2a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299616 GeneID:235459 MGI:1933289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II A, 2 transcript_id : NM_001039519.1

name	Gcnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430728 GeneID:72077 MGI:1919327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosaminyl (N-acetyl) transferase 3, mucin type transcript_id : NM_028087.2

name	6430514L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130670 GeneID:76886 MGI:1924136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430514L14 gene transcript_id : NM_029784.2

name	Myo1e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299823 GeneID:71602 MGI:106621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IE transcript_id : NM_181072.3

name	Ccnb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198317 GeneID:12442 MGI:88311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin B2 transcript_id : NM_007630.2

name	Rnf111 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130811 GeneID:93836 MGI:1934919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger 111 transcript_id : NM_033604.2

name	Rora (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305439 CCDS:CCDS23314.1 GeneID:19883 MGI:104661
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0046068 - cGMP metabolism [Evidence IMP]; GO:0006809 - nitric oxide biosynthesis [Evidence IMP]; GO:0043030 - regulation of macrophage activation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : RAR-related orphan receptor alpha protein_id : NP_038674.1

name	9530091C08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893143 GeneID:320440 MGI:2444034
definition	codon_start : 1 product : hypothetical protein LOC320440 protein_id : NP_796133.1

name	Narg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34594671 CCDS:CCDS23315.1 GeneID:93697 MGI:2135947
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : NMDA receptor-regulated gene 2 protein_id : NP_663593.2

name	EG244913 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386194 GeneID:244913 MGI:3645765
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984805.1

name	Anxa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6996913 CCDS:CCDS23316.1 GeneID:12306 MGI:88246
definition	GO_component : GO:0030054 - cell junction [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005769 - early endosome [Evidence IDA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0042383 - sarcolemma [Evidence IDA]; GO:0001725 - stress fiber [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0004859 - phospholipase inhibitor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030199 - collagen fibril organization [Evidence IMP]; GO:0042730 - fibrinolysis [Evidence IMP] codon_start : 1 note : calpactin I heavy chain; annexin II; lipocortin II; chromobindin 8; 33-kDa calcimedin; 36-kDa calelectrin; 33-kDa lymphocyte Ca<2+>- binding protein; 33kDa lymphocyte Ca<2+>- binding protein product : annexin A2 protein_id : NP_031611.1

name	Foxb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11693138 GeneID:64290 MGI:1927549
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : mesoderm/mesenchyme forkhead 3; forkhead box B1b; forkhead box B1a product : forkhead box B1 protein_id : NP_071773.1

name	Bnip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980639 CCDS:CCDS23319.1 GeneID:12175 MGI:109327
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0043231 - intracellular membrane-bound organelle [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0006915 - apoptosis [Evidence ISS] [Evidence IEA] codon_start : 1 note : isoform beta is encoded by transcript variant beta; BCL2/adenovirus E1B 19 kDa-interacting protein 2 beta; BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 product : BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 isoform beta protein_id : NP_058067.2

name	Bnip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606148 CCDS:CCDS23318.1 GeneID:12175 MGI:109327
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0043231 - intracellular membrane-bound organelle [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0006915 - apoptosis [Evidence ISS] [Evidence IEA] codon_start : 1 note : isoform alpha is encoded by transcript variant alpha; BCL2/adenovirus E1B 19 kDa-interacting protein 2 beta; BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 product : BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 isoform alpha protein_id : NP_001008239.1

name	LOC624164 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94386204 GeneID:624164
definition	codon_start : 1 product : hypothetical protein protein_id : XP_893778.2

name	Gtf2a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299617 GeneID:235459 MGI:1933289
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005672 - transcription factor TFIIA complex [Evidence IEA] GO_function : GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006367 - transcription initiation from RNA polymerase II promoter [Evidence IEA] codon_start : 1 note : general transcription factor IIA, 2 (12kD subunit) product : general transcription factor II A, 2 protein_id : NP_001034608.1

name	Gcnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430729 GeneID:72077 MGI:1919327
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence ISS] codon_start : 1 note : core 2 beta-1,6-N-acetylglucosaminyltransferase II product : glucosaminyl (N-acetyl) transferase 3, mucin type protein_id : NP_082363.2

name	6430514L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037475 GeneID:76886 MGI:1924136
definition	codon_start : 1 product : hypothetical protein LOC76886 protein_id : NP_084060.1

name	Myo1e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299824 GeneID:71602 MGI:106621
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : molecular motor product : myosin IE protein_id : NP_851417.2

name	Ccnb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198318 CCDS:CCDS23320.1 GeneID:12442 MGI:88311
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : cyclin B2 protein_id : NP_031656.2

name	Rnf111 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809022 CCDS:CCDS23321.1 GeneID:93836 MGI:1934919
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007389 - pattern specification [Evidence IMP] codon_start : 1 product : ring finger 111 protein_id : NP_291082.1

name	EG665815 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665815
definition	number : 1 pseudo : _no_value

clone name	MSMg01-084D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-425L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-442H24.T7 (MSMg01no442_h24.b1)	MSMg01-442H24.TJ (MSMg01no442_h24.g1)
ACC	AG532132	AG532133
length	910	803
length of high quality (start - end)	---	342 (76 - 417)
definition	CHROMAT_FILE: MSMg01no442_h24.b1 PHD_FILE: MSMg01no442_h24.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:41 2005	CHROMAT_FILE: MSMg01no442_h24.g1 PHD_FILE: MSMg01no442_h24.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:09:41 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CCTCAAAATTGCGGCGCTAAACGACTCACTATATTCAGAAATCCGCGGAA TTCTCTCCATTTTCATAGAATTGGTGTGTGTGTGTGTGTGTGTGTGTGTG TTTACTCGCNGGCCTGTTCCACGTTATTTTTATCACCCGCCCGCAGAGAC TCGACTCCCTAGCCCGGGGGGTGGTCATGCTAGGCACCGAACAACAGTAA GCACGGGCGATGGGCGCGGCAGACCCCCCGAGACCACGGTAGACGTCTTT TGCGCGCATGCGCCGCTACTCACCGGAATCCGACGAGCTAAGAGTAAGCG CCCCCGGACAAACCTTTTTTTTCCCCTCCGCCCAACAACACCTCCAGATC CCCTTCTTTTTTCTTCCTACCCCATAAACTCCACCAGCACCAAAGCACAC CCACTAACACCACCTCCCATACAACATTTATTTTCCCACTCTTACACATT ACACTACCTTTCATTTTTCCCATCATTATACCCTTTCATTTACACTAATT TCACTGTTCCCCGCTCCTCTTTTCTTTATCTCTTCATCCAATACCCATAA CTACTTTCTCTTTAAATATATTCTTATATCCTATTGTCACACAATTAATC CCTTTTTTCATAAACACACTTCTCCATTTTCACCCTCCATTACAACATAC TCCATTACTATATATATCCATCAATTTACCTCCTACCCTCCTTCTCTCTT ATACTTCACACTCATATGAATCTACACTCCACATATTATCTATCTCTCAC CCCCCGAATATCATTATAACCCCCACCCTCCACCATTCTCTACCTCCCCA TTATACTACAGTTTATCATACAAGTCTTAATTTCACCACCTTATATACCA CTCATCACACCATTTCTATATACCTACTTCCAGATCCATTACTCATTACT TCCGCCGCCT	NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXTTCGTCTCTTCAGCGCCGTGTCAGT GTGTGGTTATCCGGAGTTTGTGGAGGATCTGACCATTACCAGAGACTTCA CTGGCACTGCAAAGGCCTTTGCTGACCTGGGGAGGTGTAACGCACTGACC CATTCTCAGTAATTAAACTAGAGTTTTAGCAATCCTAGTGAGAAGCAAAG CTCACTCTGTTTCTTCTAGCAACGTCCCTATTGCGAGACACTGCACAGCC CGGGGTGAGGTAGAGGAGCAAAGGCTGTGTTTTATCTCTAAGCTAAAATA GGGTTGCCATTAATCTTGCATGAGATAGGAAATATTTATGGGCATAGGCA CTTACATATTGCTTGTCAGCCTCTGTGACTTTGGGCTTATTATGATATTT TTTGGATTCCTTTGGCCCCCAATGGCTGTCTTCTTACCTCTTTTACGCCT TCATTCCTTTCTTACTCTTCCCCCTCATTTCCTATTTTTATATCCCCCTT TTCTTTCTCTCTCTTCTCCTAACTTCTCTCTTTTTATATTCCACCCTTTC TTTTCCCCCTTTTTTTCTTTTTCTCTCTTTTTCTCTCTCTTTTTTTTTTT CTTTTGCCCTCCTTCCTTTCCCCCCCCCCTTTTCCTTTTTTTTTTTTTTT TCTCCCTTCTCCCCCTTCTTTTTCTCTCTTCTTATTTATCTTTTCCCACC ACCCCCTCCTTCCCTTTTTATTCTTTTTCCCCCCCCTTTTCTCCTTCCTT TTC
quality values	Open. Hide. 8 8 6 8 8 10 10 8 8 8 12 15 18 20 20 23 19 27 15 17 21 27 27 37 27 29 23 22 30 23 22 8 10 9 9 9 10 11 8 11 8 9 10 15 24 25 34 28 30 28 28 36 31 59 59 30 30 19 15 8 8 8 8 8 8 8 8 8 8 8 17 25 33 37 37 41 50 50 53 50 50 59 59 59 48 48 48 48 48 43 43 33 33 21 25 16 17 19 14 10 12 10 9 9 9 9 9 18 3 0 3 14 9 10 11 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 10 11 6 10 6 6 8 6 6 8 8 8 8 8 8 8 9 9 9 9 9 9 8 10 10 8 8 8 8 8 8 8 12 12 10 10 10 10 8 8 8 6 8 10 12 10 8 10 10 10 10 10 8 8 8 6 8 8 10 10 10 9 8 8 8 12 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 8 10 8 8 8 9 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 15 15 11 11 9 8 8 6 6 6 6 9 8 8 8 8 13 13 13 15 11 11 8 8 8 8 8 8 10 10 10 10 10 11 11 12 11 11 11 10 10 10 10 10 10 10 10 10 8 8 8 11 10 8 9 6 6 8 8 8 8 8 8 8 8 8 9 10 17 32 12 9 8 8 8 8 10 21 12 17 17 15 12 12 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 8 8 8 6 6 13 12 10 10 6 6 6 6 8 9 9 9 11 13 18 8 8 6 6 8 8 8 8 8 8 8 8 6 6 6 6 8 8 10 8 10 6 6 8 8 8 8 8 7 6 8 6 6 8 9 9 9 9 9 10 9 9 9 8 8 8 6 8 8 8 8 6 6 8 8 8 10 8 8 8 8 12 15 10 10 6 6 8 8 8 8 10 10 11 10 10 10 16 13 13 13 12 10 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 10 10 12 11 12 11 12 12 8 10 10 9 9 8 8 10 8 8 6 7 7 8 8 10 10 10 8 8 6 6 8 8 13 15 15 11 10 6 6 6 6 10 8 8 8 10 10 10 8 8 8 8 9 10 8 8 6 6 6 6 9 12 9 8 8 8 8 8 8 8 8 8 8 8 6 6 11 10 8 8 8 8 8 8 8 9 10 9 8 8 8 8 8 8 10 8 8 8 10 10 10 10 11 11 13 8 10 7 8 7 8 8 10 8 8 8 8 8 8 8 10 10 11 11 10 10 10 12 15 17 11 7 8 6 6 8 8 8 8 8 10 8 6 6 6 6 9 8 8 8 8 8 8 8 6 6 8 8 11 11 9 12 8 8 8 6 6 8 6 9 8 8 6 6 8 8 10 10 10 12 7 6 10 11 11 11 17 11 11 10 10 8 15 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 12 12 12 12 11 11 9 9 8 8 8 8 8 8 8 6 6 8 8 10 8 8 8 6 6 8 8 8 7 9 10 10 9 9 10 10 8 6 6 8 6 6 8 8 8 10 8 8 10 10 8 7 7 7 6 6 8 8 8 8 10 10 8 8 8 7 7 10 8 8 8 8 8 10 12 10 10 8 8 8 8 8 8 8 8 8 9 11 11 11 11 8 8 8 8 8 8 9 8 9 9 9 8 8 8 8 8 6 6 6 6 8 6 8 8 8 8 7 7 8 8 8 8 8 8 6 8 8 8 10 9 9 9 9 9 9 8 8 10 8 8 8 9 9 9 8 6 6 6 6 8 8 10 10 10 10 8 8 6 6 8 8 8 6 7 8 8 11 8 8 8 8 8 9 9 8 8 8 8 8 8 8 13 11 8 8 6 6 10 10 8 8 8 8 8 8 6 6 6 6 8 8 9 10 10 9 7 6 8 8 8 10 10 9 8 9 9 7 7 8 8 7 7 7 7	Open. Hide. 0 3 6 6 10 10 11 11 10 8 8 8 9 6 8 8 9 22 22 32 37 34 39 34 30 29 26 32 29 31 39 25 17 7 7 8 8 7 9 9 14 14 24 22 30 30 27 20 25 11 11 11 21 21 41 48 42 42 34 25 18 8 8 8 8 8 8 12 22 17 21 29 29 33 33 43 43 48 57 57 59 59 59 53 53 50 50 50 53 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 41 41 41 48 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 57 57 57 57 68 68 68 68 68 68 68 57 68 68 68 68 57 57 57 57 57 59 57 57 57 57 57 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 59 59 59 57 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 54 54 59 59 59 59 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 59 59 42 24 24 12 24 15 18 15 34 34 59 59 59 57 57 57 59 59 54 59 57 59 59 54 48 47 47 46 42 39 36 36 42 43 42 48 48 39 25 19 10 10 10 19 25 21 12 12 12 25 13 18 18 34 34 57 57 48 48 48 48 41 41 47 59 47 41 41 29 27 32 32 37 36 36 39 43 44 36 43 39 43 36 36 36 43 59 48 48 48 32 32 18 18 9 15 11 11 11 12 12 22 12 14 19 28 26 30 30 26 23 22 29 27 30 25 16 16 14 19 28 34 19 18 22 25 33 26 17 10 10 8 8 8 11 10 11 10 9 10 12 14 10 10 10 10 12 8 8 6 6 8 8 10 12 10 10 10 10 8 10 10 8 8 9 10 8 8 8 8 8 6 6 8 8 8 8 9 9 9 9 9 8 8 6 6 8 8 8 8 10 9 9 8 8 8 8 11 12 8 10 10 13 8 8 8 10 10 10 10 8 8 8 11 8 10 8 8 8 8 8 6 9 9 9 16 15 16 8 8 10 12 12 8 11 8 8 9 19 19 13 8 8 10 8 12 15 8 8 6 6 11 8 10 9 9 9 9 11 9 12 12 8 8 8 8 8 8 11 8 8 11 11 11 11 12 10 10 10 13 13 14 13 9 9 8 8 11 20 25 24 23 17 14 14 14 17 16 13 8 8 8 8 8 9 11 15 15 15 16 15 10 10 8 8 8 8 8 8 15 22 28 28 26 17 14 8 8 13 13 13 11 8 8 8 8 8 8 8 8 8 8 15 15 12 12 10 12 12 23 18 11 12 11 8 8 8 8 8 10 6 6 6 6 15 13 16 18 20 21 19 25 25 16 15 12 11 9 8 8 8 8 8 10 12 14 10 15 18 12 11 9 9 15 14 16 28 21 21 11 10 9 10 8 8 6 6 8 10 10 6 6 6 10 10 10 12 12 12 9 9 11 13 10 6 6 6 6 6 8 8 10 8 8 10 13 9 7 8 12 21 24 12 12 12 8 8 8 8 10 13 10 10 12 16 16 12 11 12 16 19 15 11 10 8 8 8 9 10 8 8 8 8 8 8 9 9 9 12 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no442_h24.g1 MSMg01no442_h24.g1 CHROMAT_FILE:
MSMg01no442_h24.g1 PHD_FILE: MSMg01no442_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:41 2005
         (342 letters)



>mm_chr9_69308089_69308830
          Length = 742

 Score =  638 bits (330), Expect = 0.0
 Identities = 339/342 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcgtctcttcagcgccgtgtcagtgtgtggttatccggagtttgtggaggatctgacca 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcgtctcttcagcgccatgtcagtgtgtggttatccggagtttgtggaggatctgacca 260

                                                                       
Query: 61  ttaccagagacttcactggcactgcaaaggcctttgctgacctggggaggtgtaacgcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaccagagacttcactggcactgcaaaggcctttgctgacctggggaggtgtaacgcac 320

                                                                       
Query: 121 tgacccattctcagtaattaaactagagttttagcaatcctagtgagaagcaaagctcac 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacccattctcagtaatcaaactagagttttagcaatcctagtgagaagcaaagctcac 380

                                                                       
Query: 181 tctgtttcttctagcaacgtccctattgcgagacactgcacagcccggggtgaggtagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtttcttctagcaacgtccctattgcgagacactgcacagcccggggtgaggtagag 440

                                                                       
Query: 241 gagcaaaggctgtgttttatctctaagctaaaatagggttgccattaatcttgcatgaga 300
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 gagcaaaggctgtgttttatctctaagctaaaatagggttgccattaaacttgcatgaga 500

                                                     
Query: 301 taggaaatatttatgggcataggcacttacatattgcttgtc 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggaaatatttatgggcataggcacttacatattgcttgtc 542


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space:   244089
Effective search space used:   244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information