Query= MSMg01no442_l06.b1 MSMg01no442_l06.b1 CHROMAT_FILE:
MSMg01no442_l06.b1 PHD_FILE: MSMg01no442_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:59 2005
(184 letters)
>mm_chr9_45308807_45309390
Length = 584
Score = 348 bits (180), Expect = e-100
Identities = 183/184 (99%)
Strand = Plus / Minus
Query: 1 actatagtctaaatccatccctccctggctactagagttgctgaggttcgctttttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 468 actatagtctaaatccatccctccctggctactagagttgctgaggttcactttttgttt 409
Query: 61 tgtttctggttttgtctttgttttacctacttgtatctcacaaagagaggtttatttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgtttctggttttgtctttgttttacctacttgtatctcacaaagagaggtttatttgtc 349
Query: 121 tccagtgagaacatcctgctttctggctgtgacctctttgtcccctttatatccacaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tccagtgagaacatcctgctttctggctgtgacctctttgtcccctttatatccacaatg 289
Query: 181 atct 184
||||
Sbjct: 288 atct 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_l06.g1 MSMg01no442_l06.g1 CHROMAT_FILE:
MSMg01no442_l06.g1 PHD_FILE: MSMg01no442_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:59 2005
(245 letters)
>mm_chr9_45112845_45113489
Length = 645
Score = 427 bits (221), Expect = e-124
Identities = 235/245 (95%), Gaps = 10/245 (4%)
Strand = Plus / Plus
Query: 1 atcactcaaaagtaaagagataaaaacgaaggagagggtaaaattcttactaccacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcactcaaaagtaaagagataaaaacgaaggagagggtaaaattcttactaccacctaa 260
Query: 61 ccaaagagatgcactcagtgtttataggaatcaaaaagacccaaatggagaccacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaaagagatgcactcagtgtttataggaatcaaaaagacccaaatggagaccacacaca 320
Query: 121 atgctctgtgcgtccagtgccggtggtaacgagaacagcagcagcagcagcagcagcaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atgctctgtgcgtccagtgccggtggtaacgagaacagcagcagcagcag---------g 371
Query: 181 cttttgtgacaatgaacagccacccaccgctctcctcctctatcgctggtgggtaaggag 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 372 cttttgtgacaatgaacagccacc-accgctctcctcctctatcgctggtgggtaaggag 430
Query: 241 atagc 245
|||||
Sbjct: 431 atagc 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
