AAAAAATATGCTCCGTCCTCCTCCCTATTACCCATCACAAAACAAGTCAC
CAGTAGGCATTGCTTTCTGGGTGGGTAGACAAAAAAAAAAGAACCACGCA
CACAAAGATCTATCCAACCTAAGACTGAGTGCAGCAGCCGCACTAGCACC
CAACGACCCCATACACACCTTGGATCTTTTATACACCGCCGAGCAGCGGT
GCCTTCCCCGGCGTAGCATAATTATACTACGCACGACCCNGACCCNGGGA
ACCTCCAACCCTAAACAAGTTGGTCCTCGCCAAAAAAAAAACGCGGCGGG
GGNAAATTTCATTTAAAGTCTCTTTACCCATCCCAACCCCCCCCAAAGGG
AACCTAATAATTTTCAATTTTTTGGGGAACCAAAGGGAAAAAAAAAAAAA
AACCTCTAAAACTCCCGGGGGAAAACCCCCCGGGGGGGCAAAATAAAAAA
TTAAAAAGAGGAGGAGAGTTCAACACCCCACAAAAAATGAATAAAAGGAA
GCGGGAGAGGGGGGGGGTCGGACGTAAACATACCCCGACAGCATACTCAG
GAAGAGTATGTAGATTTTTTGGGAGGGGAAAAAAAGCGGGGGGGGGGGGG
GGTTTTAATTTTTTAGGGAAAAAAAAAAACACCCGGGGGGGGGGGCGGTA
CAAAAAAAGAGGGGGAGGAAGTACAAAGGGGGGAGGAGGGGTGTCGACAA
TCAAACGAAAGAAAGAAGAGAACTTCCCCCCCTACATAAAAAAAAAAGGA
AAACAAACCGCCTCGCCCCTTTAGCGTTTCTCCTATTTTAAAGAAAAAGA
AAGAAAAAGGGGGAGGGGGGGTNGTGTACGATACTTAGCGCATAGGAAGT
ACAAAAAAAAA

NNTTACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTGACAGAGGAGGGCTGAGAGGATTCAGATTTGCACC
CTGCCATGCTTCGTGACCTATAGACTTCCTTATTTATTTGCACTTACAAC
ATACTTCTTCAGAATTAAAATTCTAAACATTAGCTCTGAGTTTCATATAA
TGTTTTAAAATAAAATCTTGCCTAAAAACTAATATTGTGTCATAAACTAA
TTCTTGTGGTTACCCGTTTGATTTTCTGTAATAAGCTGTAATGAGGCTAT
TGGAGGCCAGTGAGCTATTTTTTTTGTAAGGACATTTGCTGCCAAGCCCG
ATGACCCGAGTCTAATGATCCCCAGAACCCATGTAGCGGAAGGCGAGAGC
CAGCCCCTTCAGGTTGTCCCTCCATGTGCATGCCACGGCACATACTGCAT
ACCTTTTTATTGTGCTCGAGTTTCATTACTATTCTGTAGTAATGCCTAAT
GTTACCAGAGATATCTACATTTCTTACGCCTGTAAGGTTTGTTTTCCCAA
CTTGATTACTGAAACCGAAAAATAGAATCTTATTTTAACACTATTTTCAA
TTTTTTTATGCACCTGCTACATAATTCCCATTTACTTCTCGTTATTTTTG
TTTTGTAACCCTCGAATCCCCCTTATGTACCCCTCCAACCGTTTTTTTTT
TTAATGGCCGTATATCCCCTCCAATATCATC

Query= MSMg01no448_d08.g1 MSMg01no448_d08.g1 CHROMAT_FILE:
MSMg01no448_d08.g1 PHD_FILE: MSMg01no448_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:24 2005
         (417 letters)



>mm_chr9_79989110_79989926
          Length = 817

 Score =  717 bits (371), Expect = 0.0
 Identities = 403/423 (95%), Gaps = 16/423 (3%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagaggattcagatttgcaccctgccatgcttcgtgacctatagacttccttatttattt 61
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 202 gagaggattcagatttgcaccctgccatgcttcgtgacctagagacttccttatttattt 261

                                                                       
Query: 62  gcacttacaacatacttcttcagaattaaaattctaaacattagctctgagtttcatata 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcacttacaacatacttcttcagaattaaaattctaaacattagctctgagtttcatata 321

                                                                       
Query: 122 atgttttaaaataaaatcttgcctaaaaactaatattgtgtcataaactaattcttgtgg 181
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgttttaaaataaaatcttgcctaaaaactaatattgtgtcataaactaattcttgtgg 381

                                                                       
Query: 182 ttacccgtttgattttctgtaataagctgtaatgaggctattggaggccagtgagctatt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 382 ttacccgtttgattttctgtaataagctgtaatgaggctattggaggccagtgagcta-- 439

                                                                       
Query: 242 ttttttg--------taaggacatttgctgccaagcccgatgacccgagtctaatgatcc 293
                 |        |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ------ggcagcaggtaaggacatttgctgccaagcccgatgacccgagtctaatgatcc 493

                                                                       
Query: 294 ccagaacccatgtagcggaaggcgagagccagccccttcaggttgtccctccatgtgcat 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccagaacccatgtagcggaaggcgagagccagccccttcaggttgtccctccatgtgcat 553

                                                                       
Query: 354 gccacggcacatactgcatacctttttattgtgctcgagtttcattactattctgtagta 413
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 554 gccacggcacatactgcatacatttttattgtgctcgagtttcattactattctgtagca 613

              
Query: 414 atg 416
           |||
Sbjct: 614 atg 616


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)