Query= MSMg01no449_e14.b1 MSMg01no449_e14.b1 CHROMAT_FILE:
MSMg01no449_e14.b1 PHD_FILE: MSMg01no449_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:52 2005
(586 letters)
>mm_chr9_108678504_108679489
Length = 986
Score = 1079 bits (558), Expect = 0.0
Identities = 573/578 (99%)
Strand = Plus / Minus
Query: 9 tctatgggttgccgatttcttgaagccttggaccctctctttttgggagggagtccttct 68
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 tctatgggcagcagatttcttgaagccttggaccctctctttttgggagggagtccttct 927
Query: 69 ttatatcattttttgaatcagggtcttatcctgtggctcaggctagcctgggactcacta 128
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 926 ttatatcattttttgaatcagggtcttatcctgtcgctcaggctagcctgggactcacta 867
Query: 129 catagcccatgctggcttcaaactagaggccatcctctagccttagccttctgactgttg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 catagcccatgctggcttcaaactagaggccatcctctagccttagccttctgactgttg 807
Query: 189 gggttataagcatgagccactgtaatgaaatcgatctctcatcttcttctgtcttctggc 248
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gggttataagcgtgagccactgtaatgaaatcgatctctcatcttcttctgtcttctggc 747
Query: 249 aacctacgctgctaccagctgtcaaggctgtccctagcacagcaaaaactagccctaggg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aacctacgctgctaccagctgtcaaggctgtccctagcacagcaaaaactagccctaggg 687
Query: 309 ttgggctcagaagcctccaccctcacctagtgagattgctagaaagcctagcccagttcc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttgggctcagaagcctccaccctcacctagtgagattgctagaaagcctagcccagttcc 627
Query: 369 tgcccagataccagacagtggtatcagcactgggtagaggcacatagccactgcagtgtt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgcccagataccagacagtggtatcagcactgggtagaggcacatagccactgcagtgtt 567
Query: 429 acaatgttacaaaccactgttataccttctccccatccaagcttctatttcagggctcct 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acaatgttacaaaccactgttataccttctccccatccaagcttctatttcagggctcct 507
Query: 489 tcctaggtgaggagtggaaagctggaccaggtagccccagcattaactaattcactctcg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcctaggtgaggagtggaaagctggaccaggtagccccagcattaactaattcactctcg 447
Query: 549 ttccttctgttaagtgtttcctaggggctgcatggatt 586
||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttccttctgttaagtgtttcctaggggctgcatggatt 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_e14.g1 MSMg01no449_e14.g1 CHROMAT_FILE:
MSMg01no449_e14.g1 PHD_FILE: MSMg01no449_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:52 2005
(373 letters)
>mm_chr9_108526480_108527254
Length = 775
Score = 671 bits (347), Expect = 0.0
Identities = 365/373 (97%), Gaps = 6/373 (1%)
Strand = Plus / Plus
Query: 1 accaataaataggtctgctgtttaggaggacactgtgccagcgttctcatcaacaccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaataaataggtctgctgtttaggaggacactgtgccagcgttctcatcaacaccgag 260
Query: 61 tggactgccttaaatgtgatcccttctgaatactgctaaagtattcaagtctcctttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggactgccttaaatgtgatcccttctgaatactgctaaagtattcaagtctcctttgcc 320
Query: 121 tttttcttgtacttgtgtattcacgctctaatttttgttatagtgtccactattcca--g 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tttttcttgtacttgtgtattcacgctctaatttttgttatagtgtccactattccaaag 380
Query: 179 atttatggcatcctccctggcttactcagtaacagctaagcagaattaccattacaaaca 238
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttatggcatcctccctggcttactcagtaacagctaagcagaattaccattacaaaca 440
Query: 239 cattttacctttcttca--gtattaaaaaagaactttcgaggccccttggtcttgcaaac 296
|||||||| |||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattttac--ttctccacagtattaaaaaagaactttcgaggccccttggtcttgcaaac 498
Query: 297 tttatatgcctcagtacaggggaacgccagggccaagaagtaagagtgggtgggtggggg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttatatgcctcagtacaggggaacgccagggccaagaagtaagagtgggtgggtggggg 558
Query: 357 cgggtatggggga 369
|||||||||||||
Sbjct: 559 cgggtatggggga 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 775
Length adjustment: 9
Effective length of query: 364
Effective length of database: 766
Effective search space: 278824
Effective search space used: 278824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
