NNTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGCGG
AATTCACTCACATGTTGGCACTTGATGGAGAGAAGGAGAAAAATCAAATG
CTTTAGTGGCCCGGACGCTACCACTCTTGACGTGAACATTTTTAGCTCCA
TTTAGCTCTCTCAAATAATGGGGTTATAAAATCATTTTACAAGGATGACA
CCATTAGCAAATGCTGTTCTTCTTTGCCTTGGAACTTGAAATGTATCAAT
TAGCAAATGTTTACTGAGTGTCCACTACATGCCAACACTGGGCTAGGCAT
GAAAGGAGAGCGGGCAATACTGTAAAGTGTTGGCATGTGGTGACAGTGAC
TTGGTGGAATACTGTGTTGGGCTCTTTTAAGTCCTCTCCTCATTTTATCC
AAGTTGCTGTTGTAGTTTGCTTTCTGTTGCTGTGATAAACCGCTGACCAA
AAACAAGTCAGGGAGGGAGGGGTTTGCTTTACACTGTCACACCACAGTCA
GAAAGGTAGAGCAGAACTCAAGCAGGAACCTGTAGGCAAGGTATGAAGCA
GAAGACATGGAAGTAGGCTGCCTGGTACCTCACTGTCTTTGTCCTGTTCA
AGTGCATTACTTAAATAGCCCAGGACTACCTGCCTAGACATGGCGTGACT
CACAAGTGGGTTGGGAACTCTTATATCAATTGGCACCCCACAGAATGGTT
TGCATACATGGTCACAGGCCATTCTGTGGTGACAATTCCCTTATTAAGGG
TCCAACCTCTCCCNAGATGTGTCAAGGTGACACT

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTGTTTAGCTCTGAACCCAATTTTT
TAATGGGGTTATTTGATTTTCTGGGGTCCACCTTCTTGAGTTATTTATAT
ATATTGGATATTAGTCCAGTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGAGGCCTTTTGTCTTATTGACAGTGTCTTTTGCTTTGCA
GAAGCTTTGCAGTTTCATGAGGTCCCATTTGTCAATTCTTGATCTTACAG
TGCAAGCCATTGATGTTCTATTCAGGAATTTTTCCCCTGTGCCCATATCT
TCGAGGGTTTTCCCTATTTTCTCCTCAATAAATTTCAGTGTCTCTGGTTT
TATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAATACAAGGAGATA
GGAATGGATCAATTCCCATTCTTCTACATGATGACAGCGAGTTGTGCCAG
CACCATTTATTGAAGATGCTGTCTTTTTTCCACTGGATGGTTTTTGCTCC
CTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTT
CAATTCTATTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCA
GTTGTTATCACAATTGCTCTGTACTACAGCTTTAGGTCAGGCATGGTGAT
TCCACTAGAGGTTCTTTTATCCTTGAGTAGAGTTTTTGCTATCCTAGATT
TTTTGTTATTTCA

Query= MSMg01no451_b18.b1 MSMg01no451_b18.b1 CHROMAT_FILE:
MSMg01no451_b18.b1 PHD_FILE: MSMg01no451_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:14 2005
         (595 letters)



>mm_chr9_34053039_34054033
          Length = 995

 Score = 1118 bits (578), Expect = 0.0
 Identities = 587/590 (99%), Gaps = 1/590 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattcactcacatgttggcacttgatggagagaaggagaaaaatcaaatgctttagtgg 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gaattcactcacatgttggcacttgatggagagaaggagaaaaatcaaatgctttagtgg 755

                                                                       
Query: 67  cccggacgctaccactcttgacgtgaacatttttagctccatttagctctctcaaa-taa 125
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 754 cccggacgctaccactcttgacgtgaacatttttagctccatttagctctctcaaactaa 695

                                                                       
Query: 126 tggggttataaaatcattttacaaggatgacaccattagcaaatgctgttcttctttgcc 185
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tggggttataaaatcattttgcaaggatgacaccattagcaaatgctgttcttctttgcc 635

                                                                       
Query: 186 ttggaacttgaaatgtatcaattagcaaatgtttactgagtgtccactacatgccaacac 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttggaacttgaaatgtatcaattagcaaatgtttactgagtgtccactacatgccaacac 575

                                                                       
Query: 246 tgggctaggcatgaaaggagagcgggcaatactgtaaagtgttggcatgtggtgacagtg 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgggctaggcatgaaaggagagcgggcaatactgtaaagtgttggcatgtggtgacagtg 515

                                                                       
Query: 306 acttggtggaatactgtgttgggctcttttaagtcctctcctcattttatccaagttgct 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acttggtggaatactgtgttgggctcttttaagtcctctcctcattttatccaagttgct 455

                                                                       
Query: 366 gttgtagtttgctttctgttgctgtgataaaccgctgaccaaaaacaagtcagggaggga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gttgtagtttgctttctgttgctgtgataaaccgctgaccaaaaacaagtcagggaggga 395

                                                                       
Query: 426 ggggtttgctttacactgtcacaccacagtcagaaaggtagagcagaactcaagcaggaa 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggggtttgctttacactgtcacaccacagtcagaaaggtagagcagaactcaagcaggaa 335

                                                                       
Query: 486 cctgtaggcaaggtatgaagcagaagacatggaagtaggctgcctggtacctcactgtct 545
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 actgtaggcaaggtatgaagcagaagacatggaagtaggctgcctggtacctcactgtct 275

                                                             
Query: 546 ttgtcctgttcaagtgcattacttaaatagcccaggactacctgcctaga 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttgtcctgttcaagtgcattacttaaatagcccaggactacctgcctaga 225


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)