Query= MSMg01no455_g01.b1 MSMg01no455_g01.b1 CHROMAT_FILE:
MSMg01no455_g01.b1 PHD_FILE: MSMg01no455_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
(182 letters)
>mm_chr9_35143443_35144026
Length = 584
Score = 325 bits (168), Expect = 1e-93
Identities = 180/184 (97%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 1 gtgacagcatctgaggccaggaaaggtca-cagaggctgagg-caccttcctcctccgca 58
|||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 201 gtgacagcatctgaggccaggaaagggcaacagaggctgaggtcaccttcctcctccgca 260
Query: 59 acccacttaggaccagtgcgtctttcaacactagagtggatctcaatgcattacacttcc 118
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccacttaggaccagcgcgtctttcaacactagagtggatctcaatgcattacacttcc 320
Query: 119 tctcctggcaagccccaaaaccagattcaacctcagatgccatgggctctagtggctgga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcctggcaagccccaaaaccagattcaacctcagatgccatgggctctagtggctgga 380
Query: 179 tcca 182
||||
Sbjct: 381 tcca 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 584
Length adjustment: 8
Effective length of query: 174
Effective length of database: 576
Effective search space: 100224
Effective search space used: 100224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no455_g01.g1 MSMg01no455_g01.g1 CHROMAT_FILE:
MSMg01no455_g01.g1 PHD_FILE: MSMg01no455_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
(493 letters)
>mm_chr9_35338035_35338927
Length = 893
Score = 652 bits (337), Expect = 0.0
Identities = 349/355 (98%), Gaps = 4/355 (1%)
Strand = Plus / Minus
Query: 143 tccttgttatttcttttgtttgtttggtta----cttgcttgcttgcttgcttgcttgct 198
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 893 tccttgttatttcttttgtttgtttggttacttgcttgcttgcttgcttgcttgcttgct 834
Query: 199 tttgttgagacatgatctcactatatagttctgtcctttctagtattcactatgtagaca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tttgttgagacatgatctcactatatagttctgtcctttctagtattcactatgtagaca 774
Query: 259 aggcttggccttgaactcacagagatctgcccagcctcccgagtgctgggattacaggtg 318
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 aggctgggccttgaactcacagagatctgcccagcctcccgagtgctgggattacaggtg 714
Query: 319 tgccaccaccatgcctagcttctatttcttgactcgtcattacacaacaaccgctgagca 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgccaccaccatgcctagcttctatttcttgactcgtcattacacaacaaccgctgagca 654
Query: 379 ttggaaatgtggtgagcataactacacaactgggttttccattttcattttaaatggctg 438
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttggaaatgtggtgaacataactacacaactgggttttccattttcattttaaatggctg 594
Query: 439 cacctgccaaaggactactgcgttacaacagcacagtatagaatgtccttgcata 493
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cacctgccaaaggactactgcgttacaacagcacagtatagaatgtccttgcata 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
