Query= MSMg01no455_k08.b1 MSMg01no455_k08.b1 CHROMAT_FILE:
MSMg01no455_k08.b1 PHD_FILE: MSMg01no455_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:13 2005
(569 letters)
>mm_chr9_28754631_28755599
Length = 969
Score = 1038 bits (537), Expect = 0.0
Identities = 562/573 (98%), Gaps = 6/573 (1%)
Strand = Plus / Minus
Query: 1 gttgggagtttgtggttagtctgggatacttatacttagtaagttccaggacagccagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gttgggagtttgtggttagtctgggatacttatacttagtaagttccaggacagccagag 830
Query: 61 tactgagtttgtctcag----aaaaaaacaaacaaacaaacaaaccaatccaaaaaaaaa 116
||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||
Sbjct: 829 tactgagtttgtctcagaaaaaaaaaaaaaaaaaaacaaacaaaccaatcc--aaaaaaa 772
Query: 117 aaattaacaaaatcttaacacatattactcatgcaagtcttcatatgtaggttccataca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaattaacaaaatcttaacacatattactcatgcaagtcttcatatgtaggttccataca 712
Query: 177 gccagagagcattagtaactaaatggtgttttctaagccttgaattcaattcatcccaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gccagagagcattagtaactaaatggtgttttctaagccttgaattcaattcatcccaaa 652
Query: 237 gaaagaatttttttcttcttagactatttctggtcttttatccgtgtgtacctggaagct 296
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaaagaattaaattcttcttagactatttctggtcttttatccgtgtgtacctggaagct 592
Query: 297 ttttgaagtatttgtccctaggatgttgttctgcactaaatgtttccagatcaactcaag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttttgaagtatttgtccctaggatgttgttctgcactaaatgtttccagatcaactcaag 532
Query: 357 ccactttctcttagcatctgagatgccttattgcgtgcgttgccttaacactctgccctg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ccactttctcttagcatctgagatgccttattgcgtgcgttgccttaacactctgccctg 472
Query: 417 gcttctgtgtgtgcctgcattcttcttttgaaatagccacatcctggcctgatgcaagct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gcttctgtgtgtgcctgcattcttcttttgaaatagccacatcctggcctgatgcaagct 412
Query: 477 aggccaggaccctgtctgtgtcctttgttgatattctggtctcagaggttttagcagccc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aggccaggaccctgtctgtgtcctttgttgatattctggtctcagaggttttagcagccc 352
Query: 537 acagacaagtcagaacgctgaaaaacctctgcc 569
|||||||||||||||||||||||||||||||||
Sbjct: 351 acagacaagtcagaacgctgaaaaacctctgcc 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_k08.g1 MSMg01no455_k08.g1 CHROMAT_FILE:
MSMg01no455_k08.g1 PHD_FILE: MSMg01no455_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:13 2005
(464 letters)
>mm_chr9_28595708_28596571
Length = 864
Score = 420 bits (217), Expect = e-121
Identities = 220/221 (99%)
Strand = Plus / Plus
Query: 244 gttaaagaatagacactagaaaagaggttattataggtccccatttctagactgctattc 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttaaagaataaacactagaaaagaggttattataggtccccatttctagactgctattc 503
Query: 304 agcttaggcaagaaagctcaactcatagaaagctcaatgttttggtccattttctgtcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcttaggcaagaaagctcaactcatagaaagctcaatgttttggtccattttctgtcta 563
Query: 364 tataacaaaatccttgaggctgactattctataaggaagataggcttctttaactcccag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tataacaaaatccttgaggctgactattctataaggaagataggcttctttaactcccag 623
Query: 424 tgtgttactagaagctgagaggccctgctgaggactcactg 464
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgttactagaagctgagaggccctgctgaggactcactg 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
