Query= MSMg01no456_c06.b1 MSMg01no456_c06.b1 CHROMAT_FILE:
MSMg01no456_c06.b1 PHD_FILE: MSMg01no456_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:51 2005
(597 letters)
>mm_chr9_27804356_27805354
Length = 999
Score = 1031 bits (533), Expect = 0.0
Identities = 572/587 (97%), Gaps = 6/587 (1%)
Strand = Plus / Minus
Query: 11 gaattctttattgcgtaaacactaatgggctaaagatatcataggaactcatcattggga 70
|||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 795 gaattctttacagggtaaacactaatgggctaaagatgtcataggaactcatcattggga 736
Query: 71 aatctgatccagttgctttaagcaggaggatgactccttgccaagatatgcagctcgttc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aatctgatccagttgctttaagcaggaggatgactccttgccaagatatgcagctcgttc 676
Query: 131 ccgtgttccaagcatttgtatggaagggaagtaagaatctcaagaagtgtgtagaaagat 190
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 675 ccgtgttccaagcatttgtatggaagggaagtaagaatctcaagaactgtggagaaagac 616
Query: 191 gtgtcctcagccaacctccaccaaaattctctgggaataaagtgggtccctcctccccgg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgtcctcagccaacctccaccaaaattctctgggaataaagtgggtccctcctccccgg 556
Query: 251 actccagacttctcttctgggttgtacagtgctttctacctctcagcctcttgtatgaag 310
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 acttcagatttctcttctgggttgtacagtgctttctacctctcagcctcttgtatgaag 496
Query: 311 acattaagaacaaaatcttgtccatcacaagggaatgtgagactttgctcttgtctgaat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acattaagaacaaaatcttgtccatcacaagggaatgtgagactttgctcttgtctgaat 436
Query: 371 cccaagtactcccacttcctgcaatttctttacttagcttcaaatttcccttcattaaaa 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cccaagtactcccacttcctgcaatttctttacttagcttcaaatttcccttcattaaaa 376
Query: 431 ttaagcctcatttcttgctcatctttcttgttttcttcagcaaaactgagcacaattcta 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttaagcctcatttcttgctcatctttcttgttttcttcagcaaaactgagcacaattcta 316
Query: 491 aaagctgtttttctctctgctgttttcttgccattacatcattaaaatctccccccccca 550
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 aaagctgtttttctctctgctgttttcttgccattacatcattaaaatc--cccccccca 258
Query: 551 aaaaaaaa--caattaaga--tttattccaccctagctttccctttg 593
|||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 257 aaaaaaaaaacaattaagagatttattccaccctagctttccctttg 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 999
Length adjustment: 10
Effective length of query: 587
Effective length of database: 989
Effective search space: 580543
Effective search space used: 580543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_c06.g1 MSMg01no456_c06.g1 CHROMAT_FILE:
MSMg01no456_c06.g1 PHD_FILE: MSMg01no456_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:51 2005
(179 letters)
>mm_chr9_27768229_27768807
Length = 579
Score = 321 bits (166), Expect = 1e-92
Identities = 172/174 (98%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 cacccataagaacaagcttgagtcattgcatctccctatcagaaaagcatctcttaagaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacccacaagaacaagcttgagtcattgcatctccctatcagaaaagcatctcttaagaa 260
Query: 61 ggaaatagccctaatggacatctctattacagtaataaccaaaggcattgctttcaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaatagccctaatggacatctctattacagtaataaccaaaggcattgctttcaagca 320
Query: 121 gtattaggaggcaaaaaggagacagccgataatctatggttttggg-ttttttt 173
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gtattaggaggcaaaaaggagacagccgataatctatggttttggggttttttt 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
