ATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCATATTTTCCTTTCTGTCCTCTTGTCTGCTAACTTGACTTTTAT
CCTTTTCTCACTAAAATGCTTCCACTGAGAAGGACGTAAGCGTAAAAAGC
ACAAAAAACATTTTAAGAAACGTTTTAAAGGTCTTGATCGCTCCAAAGGT
AGGTACAAGCAGTTCTCTACCTGTGCTGTTTATACACCTTGATTTCTGTC
TAAGAAGGTAAAATGAACATTAGTGTGCAGCTTAAACATAAAACTAAACT
TTAAGCTGGAACTATTTGCCTGATTCTAAAATAAATCTAAGGACCATAGC
ATACGTTGTAATTTCCGTTGTGTAGTGCCTTTAGCGCTCTTTGACCATCG
GTCGTGAGGTGTGTAAGATCTGCAAGTCTTGAGCTCCTGTTTTTCTTTGT
CATAGATAAGCCCAAAGAAGCAAAAAAGGATACATTTCTGGAAAAATTGG
CAACTCAAGTAATAAAAAATGTTCAAGTGAAAATTACAGACATTCACATT
AAATATGAAGATGATGTAAGTAATTTCAGTATTTTGCTGGGCATTGAATG
TGTTTTATGACATTCTGTATCTTATGAAGTTTCCATCCAAAAAATAAACT
GAACCTAATTTTAATTTTAAGATAACCCACCCCCGGAAAATATGCTAAGG
GTTCCCCCCCTTCCCCACTCAAACAAGGTTGGGTCCAGGCCATGGTTGAC
TTAAAACAAAATGTGGAAAACTGTTTGTTTGGGG

NNNNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATAACTAAAC
ATGATAAAAGCAATCTACAGCAAACCAGGAGCCAACATCAAAGTAAATGG
AGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCC
CACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCA
ATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGT
CAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTA
AAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTA
GCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAA
GAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAG
TCACAAATAATATAAAATATCTCGGAGTGACTCTAACTAAGGAAGTGAAA
GATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTTAAGAAGA
TCTCCGAAGATGGAAAGATCTCCCATGCTCATGTATTGGNAGGACCACCA
TTGTAAAAAAGGGCTATCTTGGCCAAATGCAATCTAAAGAATTCCAGGGG
CTCCCCCTCAAAATTCTTACCTCAATTCTTTCTTGGAATTAAAAAAAAAA
AACCCCCG

Query= MSMg01no457_j16.b1 MSMg01no457_j16.b1 CHROMAT_FILE:
MSMg01no457_j16.b1 PHD_FILE: MSMg01no457_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:52 2005
         (502 letters)



>mm_chr9_67718373_67719274
          Length = 902

 Score =  948 bits (490), Expect = 0.0
 Identities = 496/498 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcatattttcctttctgtcctcttgtctgctaacttgacttttatccttttctc 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatattttcttttctgtcctcttgtctgctaacttgacttttatccttttctc 264

                                                                       
Query: 65  actaaaatgcttccactgagaaggacgtaagcgtaaaaagcacaaaaaacattttaagaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actaaaatgcttccactgagaaggacgtaagcgtaaaaagcacaaaaaacattttaagaa 324

                                                                       
Query: 125 acgttttaaaggtcttgatcgctccaaaggtaggtacaagcagttctctacctgtgctgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acgttttaaaggtcttgatcgctccaaaggtaggtacaagcagttctctacctgtgctgt 384

                                                                       
Query: 185 ttatacaccttgatttctgtctaagaaggtaaaatgaacattagtgtgcagcttaaacat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttatacaccttgatttctgtctaagaaggtaaaatgaacattagtgtgcagcttaaacat 444

                                                                       
Query: 245 aaaactaaactttaagctggaactatttgcctgattctaaaataaatctaaggaccatag 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 aaaactaaactttaagctggaactatttgccagattctaaaataaatctaaggaccatag 504

                                                                       
Query: 305 catacgttgtaatttccgttgtgtagtgcctttagcgctctttgaccatcggtcgtgagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catacgttgtaatttccgttgtgtagtgcctttagcgctctttgaccatcggtcgtgagg 564

                                                                       
Query: 365 tgtgtaagatctgcaagtcttgagctcctgtttttctttgtcatagataagcccaaagaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtgtaagatctgcaagtcttgagctcctgtttttctttgtcatagataagcccaaagaa 624

                                                                       
Query: 425 gcaaaaaaggatacatttctggaaaaattggcaactcaagtaataaaaaatgttcaagtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcaaaaaaggatacatttctggaaaaattggcaactcaagtaataaaaaatgttcaagtg 684

                             
Query: 485 aaaattacagacattcac 502
           ||||||||||||||||||
Sbjct: 685 aaaattacagacattcac 702


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)