Query= MSMg01no457_m01.b1 MSMg01no457_m01.b1 CHROMAT_FILE:
MSMg01no457_m01.b1 PHD_FILE: MSMg01no457_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:05 2005
(381 letters)
>mm_chr9_99722612_99723391
Length = 780
Score = 665 bits (344), Expect = 0.0
Identities = 368/376 (97%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 7 gaattcacttatattac-caagcatctgacatttgtactataatttacaagaacctttat 65
||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaattcacttatagaacacaagcgtctgacatttgtactataatttacaagaacctttat 521
Query: 66 gtccattatatatcaattctatctccctttcctcagatcacaacctctttttctaccagc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gtccattatatatcaattctatctccctttcctcagatcacaacctctttttctaccagc 461
Query: 126 tttgtcatctcagcaaatggagcatttcaaggcagcctttcccagactcctccatagcag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tttgtcatctcagcaaatggagcatttcaaggcagcctttcccagactcctccatagcag 401
Query: 186 gacacatgtataaaatggtagtgttcgtatgggatagcaaggaagtgaaatgaagattga 245
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 400 gacacatgtataaaa-ggtagtgttcgtatgggataccaaggaagtgaaat-aagattga 343
Query: 246 ttttaggggaaaggggctcccagggtggacaggacaccagacaagtggccaagatcaccc 305
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttttagggtaaaggggctcccagggtggacaggacaccagacaagtggccaagatcaccc 283
Query: 306 tgtgcttctagctattccagtgtaccgggcactggaggctccctgctggcatgctggcag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgtgcttctagctattccagtgtaccgggcactggaggctccctgctggcatgctggcag 223
Query: 366 taagggcagtttgcag 381
||||||||||||||||
Sbjct: 222 taagggcagtttgcag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_m01.g1 MSMg01no457_m01.g1 CHROMAT_FILE:
MSMg01no457_m01.g1 PHD_FILE: MSMg01no457_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:05 2005
(347 letters)
>mm_chr9_99536121_99536867
Length = 747
Score = 572 bits (296), Expect = e-168
Identities = 331/352 (94%), Gaps = 16/352 (4%)
Strand = Plus / Plus
Query: 4 cctactcaggctgggatacatctgggtgtggctttgctcctgggataatgctctctggaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cctactcaggctgggatacatctgggtgtggctttgctcctgggataatgctctctggaa 263
Query: 64 acaccctcatagataagctgagaggtgtgtctcctaggtgactccaatcccagtcaagtt 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaccctcctagataagctgagaggtgtgtctcctaggtgactccaatcccagtcaagtt 323
Query: 124 gacaaggactaagacacgtttcttctctgcctttggattgaatttaagtgacaggatctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gacaaggactaagacacgtttcttctctgcctttggattgaatttaagtgacaggatcac 383
Query: 184 acaggctgggaagaacttgataaatagggaggtgtgtatcttttctcatcttagcctcag 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 acaggctgggaagaacttgataaatggggaggtgtgtatcttttctcatcttagcctcag 443
Query: 244 tctgtttttttt--------aaaactattcttggaggaacgctgcttactggcttgctgc 295
|||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 tctg--------caggggcaaaaactattcttggaggaacgctgcttactggcttgctcc 495
Query: 296 aatagcttgctgagtttgttttcttatacactccaggatcatgtgtccagaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatagcttgctgagtttgttttcttatacactccaggatcatgtgtccagaa 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
